Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.27□□□□□ -0.29
Rb1P13405 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC13.27□□□□□ -0.29
Rb1P13405 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC13.27□□□□□ -0.29
Rb1P13405 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC13.27□□□□□ -0.29
Rb1P13405 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Rb1P13405 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Rb1P13405 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC13.27□□□□□ -0.29
Rb1P13405 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC13.27□□□□□ -0.29
Rb1P13405 Gm26927-201ENSMUST00000182385 965 ntBASIC13.27□□□□□ -0.29
Rb1P13405 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Rb1P13405 Gm37008-201ENSMUST00000195712 319 ntBASIC13.27□□□□□ -0.29
Rb1P13405 Gm4959-201ENSMUST00000197271 1044 ntBASIC13.27□□□□□ -0.29
Rb1P13405 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC13.27□□□□□ -0.29
Rb1P13405 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rb1P13405 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Rb1P13405 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rb1P13405 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Rb1P13405 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rb1P13405 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rb1P13405 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rb1P13405 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Rb1P13405 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rb1P13405 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Rb1P13405 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rb1P13405 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rb1P13405 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rb1P13405 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rb1P13405 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rb1P13405 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rb1P13405 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC13.26□□□□□ -0.29
Rb1P13405 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC13.26□□□□□ -0.29
Rb1P13405 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rb1P13405 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC13.26□□□□□ -0.29
Rb1P13405 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Rb1P13405 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC13.26□□□□□ -0.29
Rb1P13405 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
Rb1P13405 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC13.26□□□□□ -0.29
Rb1P13405 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rb1P13405 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Rb1P13405 Gm27501-201ENSMUST00000183599 107 ntBASIC13.26□□□□□ -0.29
Rb1P13405 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rb1P13405 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rb1P13405 AC073947.2-201ENSMUST00000215888 1130 ntBASIC13.26□□□□□ -0.29
Rb1P13405 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC13.26□□□□□ -0.29
Rb1P13405 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.26□□□□□ -0.29
Rb1P13405 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rb1P13405 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rb1P13405 Gm9755-201ENSMUST00000032981 1356 ntBASIC13.26□□□□□ -0.29
Rb1P13405 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rb1P13405 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rb1P13405 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rb1P13405 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rb1P13405 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC13.26□□□□□ -0.29
Rb1P13405 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rb1P13405 Matn2-203ENSMUST00000226766 3252 ntBASIC13.26□□□□□ -0.29
Rb1P13405 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Rb1P13405 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rb1P13405 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rb1P13405 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC13.26□□□□□ -0.29
Rb1P13405 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Rb1P13405 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rb1P13405 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Rb1P13405 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rb1P13405 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rb1P13405 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rb1P13405 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rb1P13405 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rb1P13405 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rb1P13405 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC13.25□□□□□ -0.29
Rb1P13405 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Rb1P13405 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.25□□□□□ -0.29
Rb1P13405 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Rb1P13405 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rb1P13405 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC13.25□□□□□ -0.29
Rb1P13405 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rb1P13405 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Rb1P13405 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
Rb1P13405 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Rb1P13405 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC13.25□□□□□ -0.29
Rb1P13405 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC13.25□□□□□ -0.29
Rb1P13405 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Rb1P13405 Gm44364-201ENSMUST00000198368 141 ntBASIC13.25□□□□□ -0.29
Rb1P13405 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rb1P13405 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rb1P13405 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Rb1P13405 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rb1P13405 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rb1P13405 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Rb1P13405 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC13.25□□□□□ -0.29
Rb1P13405 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC13.25□□□□□ -0.29
Rb1P13405 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Rb1P13405 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rb1P13405 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rb1P13405 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rb1P13405 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rb1P13405 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC13.25□□□□□ -0.29
Rb1P13405 CT025624.1-201ENSMUST00000224007 2700 ntBASIC13.25□□□□□ -0.29
Rb1P13405 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rb1P13405 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rb1P13405 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms