Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp6P0C0A3 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp6P0C0A3 AC125108.1-201ENSMUST00000218986 2330 ntBASIC14.07□□□□□ -0.16
Chmp6P0C0A3 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp6P0C0A3 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Chmp6P0C0A3 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Chmp6P0C0A3 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp6P0C0A3 Gm8213-201ENSMUST00000118191 441 ntBASIC14.07□□□□□ -0.16
Chmp6P0C0A3 Gm12203-201ENSMUST00000118235 598 ntBASIC14.07□□□□□ -0.16
Chmp6P0C0A3 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC14.07□□□□□ -0.16
Chmp6P0C0A3 Gm12209-201ENSMUST00000120089 596 ntBASIC14.07□□□□□ -0.16
Chmp6P0C0A3 Gm6161-201ENSMUST00000121942 1102 ntBASIC14.07□□□□□ -0.16
Chmp6P0C0A3 Gm24644-201ENSMUST00000157114 139 ntBASIC14.07□□□□□ -0.16
Chmp6P0C0A3 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Chmp6P0C0A3 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Chmp6P0C0A3 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp6P0C0A3 Gm6254-201ENSMUST00000168178 1072 ntBASIC14.07□□□□□ -0.16
Chmp6P0C0A3 Gm6153-201ENSMUST00000172004 1058 ntBASIC14.07□□□□□ -0.16
Chmp6P0C0A3 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Chmp6P0C0A3 Gm5641-202ENSMUST00000198699 1080 ntBASIC14.07□□□□□ -0.16
Chmp6P0C0A3 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Chmp6P0C0A3 Gm45841-201ENSMUST00000207700 164 ntBASIC14.07□□□□□ -0.16
Chmp6P0C0A3 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC14.07□□□□□ -0.16
Chmp6P0C0A3 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC14.07□□□□□ -0.16
Chmp6P0C0A3 Gm7561-201ENSMUST00000211203 886 ntBASIC14.07□□□□□ -0.16
Chmp6P0C0A3 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp6P0C0A3 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Chmp6P0C0A3 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp6P0C0A3 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp6P0C0A3 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Chmp6P0C0A3 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp6P0C0A3 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp6P0C0A3 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp6P0C0A3 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp6P0C0A3 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp6P0C0A3 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp6P0C0A3 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC14.07□□□□□ -0.16
Chmp6P0C0A3 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp6P0C0A3 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Chmp6P0C0A3 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp6P0C0A3 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp6P0C0A3 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp6P0C0A3 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC14.06□□□□□ -0.16
Chmp6P0C0A3 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC14.06□□□□□ -0.16
Chmp6P0C0A3 Gm11618-201ENSMUST00000117946 267 ntBASIC14.06□□□□□ -0.16
Chmp6P0C0A3 Gm13369-201ENSMUST00000119442 987 ntBASIC14.06□□□□□ -0.16
Chmp6P0C0A3 Gm10156-201ENSMUST00000122364 462 ntBASIC14.06□□□□□ -0.16
Chmp6P0C0A3 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Chmp6P0C0A3 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp6P0C0A3 Gm24196-201ENSMUST00000179161 110 ntBASIC14.06□□□□□ -0.16
Chmp6P0C0A3 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp6P0C0A3 Gm38230-201ENSMUST00000193572 1159 ntBASIC14.06□□□□□ -0.16
Chmp6P0C0A3 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Chmp6P0C0A3 Gm44069-201ENSMUST00000204898 506 ntBASIC14.06□□□□□ -0.16
Chmp6P0C0A3 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp6P0C0A3 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC14.06□□□□□ -0.16
Chmp6P0C0A3 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp6P0C0A3 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Chmp6P0C0A3 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp6P0C0A3 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp6P0C0A3 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Chmp6P0C0A3 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp6P0C0A3 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp6P0C0A3 Gm43423-201ENSMUST00000198390 2094 ntBASIC14.06□□□□□ -0.16
Chmp6P0C0A3 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp6P0C0A3 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Chmp6P0C0A3 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp6P0C0A3 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp6P0C0A3 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Chmp6P0C0A3 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp6P0C0A3 AC154747.3-201ENSMUST00000224471 3470 ntBASIC14.06□□□□□ -0.16
Chmp6P0C0A3 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Chmp6P0C0A3 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp6P0C0A3 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp6P0C0A3 Mypopos-202ENSMUST00000205975 2321 ntBASIC14.06□□□□□ -0.16
Chmp6P0C0A3 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp6P0C0A3 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp6P0C0A3 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp6P0C0A3 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Chmp6P0C0A3 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp6P0C0A3 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp6P0C0A3 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC14.05□□□□□ -0.16
Chmp6P0C0A3 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp6P0C0A3 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp6P0C0A3 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC14.05□□□□□ -0.16
Chmp6P0C0A3 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp6P0C0A3 Gm11425-201ENSMUST00000119608 498 ntBASIC14.05□□□□□ -0.16
Chmp6P0C0A3 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp6P0C0A3 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC14.05□□□□□ -0.16
Chmp6P0C0A3 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC14.05□□□□□ -0.16
Chmp6P0C0A3 Gm8835-201ENSMUST00000173096 1169 ntBASIC14.05□□□□□ -0.16
Chmp6P0C0A3 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC14.05□□□□□ -0.16
Chmp6P0C0A3 Gm42442-201ENSMUST00000197951 1133 ntBASIC14.05□□□□□ -0.16
Chmp6P0C0A3 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC14.05□□□□□ -0.16
Chmp6P0C0A3 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Chmp6P0C0A3 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp6P0C0A3 Gm9396-201ENSMUST00000076703 567 ntBASIC14.05□□□□□ -0.16
Chmp6P0C0A3 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp6P0C0A3 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC14.05□□□□□ -0.16
Chmp6P0C0A3 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms