Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sod1P08228 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC12.04□□□□□ -0.48
Sod1P08228 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.04□□□□□ -0.48
Sod1P08228 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Sod1P08228 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sod1P08228 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Sod1P08228 Gm43378-201ENSMUST00000199336 582 ntBASIC12.04□□□□□ -0.48
Sod1P08228 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC12.04□□□□□ -0.48
Sod1P08228 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC12.04□□□□□ -0.48
Sod1P08228 AC107638.1-201ENSMUST00000213690 1061 ntBASIC12.04□□□□□ -0.48
Sod1P08228 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sod1P08228 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.04□□□□□ -0.48
Sod1P08228 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC12.04□□□□□ -0.48
Sod1P08228 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.04□□□□□ -0.48
Sod1P08228 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sod1P08228 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sod1P08228 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sod1P08228 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Sod1P08228 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sod1P08228 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sod1P08228 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sod1P08228 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Sod1P08228 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sod1P08228 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Sod1P08228 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sod1P08228 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Sod1P08228 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sod1P08228 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC12.04□□□□□ -0.48
Sod1P08228 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.04□□□□□ -0.48
Sod1P08228 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sod1P08228 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sod1P08228 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sod1P08228 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Sod1P08228 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sod1P08228 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sod1P08228 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sod1P08228 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sod1P08228 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sod1P08228 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Sod1P08228 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.03□□□□□ -0.48
Sod1P08228 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Sod1P08228 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sod1P08228 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sod1P08228 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC12.03□□□□□ -0.48
Sod1P08228 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC12.03□□□□□ -0.48
Sod1P08228 Gm11331-201ENSMUST00000119764 288 ntBASIC12.03□□□□□ -0.48
Sod1P08228 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC12.03□□□□□ -0.48
Sod1P08228 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC12.03□□□□□ -0.48
Sod1P08228 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
Sod1P08228 Gm17040-202ENSMUST00000170597 889 ntBASIC12.03□□□□□ -0.48
Sod1P08228 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC12.03□□□□□ -0.48
Sod1P08228 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sod1P08228 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sod1P08228 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sod1P08228 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Sod1P08228 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sod1P08228 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sod1P08228 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sod1P08228 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sod1P08228 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sod1P08228 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sod1P08228 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sod1P08228 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sod1P08228 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Sod1P08228 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sod1P08228 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sod1P08228 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC12.03□□□□□ -0.48
Sod1P08228 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sod1P08228 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sod1P08228 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC12.03□□□□□ -0.48
Sod1P08228 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sod1P08228 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sod1P08228 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sod1P08228 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sod1P08228 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC12.03□□□□□ -0.48
Sod1P08228 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sod1P08228 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sod1P08228 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sod1P08228 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sod1P08228 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Sod1P08228 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sod1P08228 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Sod1P08228 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sod1P08228 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Sod1P08228 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sod1P08228 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.02□□□□□ -0.49
Sod1P08228 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sod1P08228 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sod1P08228 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.02□□□□□ -0.49
Sod1P08228 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sod1P08228 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sod1P08228 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Sod1P08228 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sod1P08228 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sod1P08228 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sod1P08228 Gm8959-201ENSMUST00000213150 571 ntBASIC12.02□□□□□ -0.49
Sod1P08228 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.02□□□□□ -0.49
Sod1P08228 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sod1P08228 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC12.02□□□□□ -0.49
Sod1P08228 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms