Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PrnpP04925 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC13.33□□□□□ -0.28
PrnpP04925 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PrnpP04925 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PrnpP04925 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PrnpP04925 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PrnpP04925 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
PrnpP04925 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
PrnpP04925 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PrnpP04925 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
PrnpP04925 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
PrnpP04925 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
PrnpP04925 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
PrnpP04925 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.32□□□□□ -0.28
PrnpP04925 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
PrnpP04925 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
PrnpP04925 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PrnpP04925 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
PrnpP04925 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC13.32□□□□□ -0.28
PrnpP04925 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
PrnpP04925 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
PrnpP04925 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
PrnpP04925 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PrnpP04925 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
PrnpP04925 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC13.32□□□□□ -0.28
PrnpP04925 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC13.32□□□□□ -0.28
PrnpP04925 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PrnpP04925 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
PrnpP04925 Gzmn-202ENSMUST00000225535 989 ntBASIC13.32□□□□□ -0.28
PrnpP04925 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
PrnpP04925 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PrnpP04925 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
PrnpP04925 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
PrnpP04925 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PrnpP04925 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
PrnpP04925 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC13.32□□□□□ -0.28
PrnpP04925 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PrnpP04925 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PrnpP04925 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
PrnpP04925 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PrnpP04925 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PrnpP04925 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
PrnpP04925 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
PrnpP04925 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PrnpP04925 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PrnpP04925 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PrnpP04925 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PrnpP04925 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
PrnpP04925 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
PrnpP04925 Gm21451-201ENSMUST00000111062 2775 ntBASIC13.31□□□□□ -0.28
PrnpP04925 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
PrnpP04925 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PrnpP04925 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC13.31□□□□□ -0.28
PrnpP04925 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
PrnpP04925 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
PrnpP04925 Gm14832-201ENSMUST00000121289 322 ntBASIC13.31□□□□□ -0.28
PrnpP04925 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PrnpP04925 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PrnpP04925 Gm25732-201ENSMUST00000175168 60 ntBASIC13.31□□□□□ -0.28
PrnpP04925 Gm43378-201ENSMUST00000199336 582 ntBASIC13.31□□□□□ -0.28
PrnpP04925 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC13.31□□□□□ -0.28
PrnpP04925 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC13.31□□□□□ -0.28
PrnpP04925 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PrnpP04925 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PrnpP04925 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PrnpP04925 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.31□□□□□ -0.28
PrnpP04925 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PrnpP04925 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
PrnpP04925 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
PrnpP04925 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.31□□□□□ -0.28
PrnpP04925 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.31□□□□□ -0.28
PrnpP04925 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PrnpP04925 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PrnpP04925 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
PrnpP04925 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
PrnpP04925 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PrnpP04925 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
PrnpP04925 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
PrnpP04925 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
PrnpP04925 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
PrnpP04925 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
PrnpP04925 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PrnpP04925 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PrnpP04925 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
PrnpP04925 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
PrnpP04925 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC13.3□□□□□ -0.28
PrnpP04925 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC13.3□□□□□ -0.28
PrnpP04925 Gm24845-201ENSMUST00000158034 109 ntBASIC13.3□□□□□ -0.28
PrnpP04925 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC13.3□□□□□ -0.28
PrnpP04925 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
PrnpP04925 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC13.3□□□□□ -0.28
PrnpP04925 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
PrnpP04925 Gm34767-201ENSMUST00000191813 1062 ntBASIC13.3□□□□□ -0.28
PrnpP04925 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC13.3□□□□□ -0.28
PrnpP04925 Gm8913-201ENSMUST00000209491 641 ntBASIC13.3□□□□□ -0.28
PrnpP04925 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PrnpP04925 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC13.3□□□□□ -0.28
PrnpP04925 Aprt-ps-201ENSMUST00000212311 505 ntBASIC13.3□□□□□ -0.28
PrnpP04925 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
PrnpP04925 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms