Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Gm23243-201ENSMUST00000180047 110 ntBASIC11.34□□□□□ -0.59
P04224 Gm24659-201ENSMUST00000180212 110 ntBASIC11.34□□□□□ -0.59
P04224 Gm24169-201ENSMUST00000180244 110 ntBASIC11.34□□□□□ -0.59
P04224 Gm23689-201ENSMUST00000180354 110 ntBASIC11.34□□□□□ -0.59
P04224 Gm8927-201ENSMUST00000181978 981 ntBASIC11.34□□□□□ -0.59
P04224 Gm27359-201ENSMUST00000184153 110 ntBASIC11.34□□□□□ -0.59
P04224 Gm27785-201ENSMUST00000184268 110 ntBASIC11.34□□□□□ -0.59
P04224 Gm27466-201ENSMUST00000184396 110 ntBASIC11.34□□□□□ -0.59
P04224 Gm27703-201ENSMUST00000184836 110 ntBASIC11.34□□□□□ -0.59
P04224 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC11.34□□□□□ -0.59
P04224 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
P04224 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC11.34□□□□□ -0.59
P04224 Gm3222-201ENSMUST00000071282 990 ntBASIC11.34□□□□□ -0.59
P04224 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
P04224 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC11.34□□□□□ -0.59
P04224 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
P04224 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
P04224 AC151895.1-201ENSMUST00000219025 1742 ntBASIC11.34□□□□□ -0.59
P04224 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
P04224 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
P04224 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
P04224 Gm5989-201ENSMUST00000096092 2077 ntBASIC11.34□□□□□ -0.59
P04224 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
P04224 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
P04224 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
P04224 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
P04224 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
P04224 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
P04224 Gm44851-201ENSMUST00000205735 2309 ntBASIC11.34□□□□□ -0.59
P04224 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
P04224 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
P04224 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
P04224 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
P04224 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
P04224 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
P04224 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
P04224 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
P04224 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
P04224 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.33□□□□□ -0.6
P04224 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.33□□□□□ -0.6
P04224 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
P04224 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
P04224 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
P04224 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC11.33□□□□□ -0.6
P04224 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC11.33□□□□□ -0.6
P04224 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
P04224 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC11.33□□□□□ -0.6
P04224 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
P04224 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC11.33□□□□□ -0.6
P04224 Gm10253-201ENSMUST00000194270 940 ntBASIC11.33□□□□□ -0.6
P04224 Gm7774-201ENSMUST00000200064 533 ntBASIC11.33□□□□□ -0.6
P04224 Gm5779-201ENSMUST00000218467 910 ntBASIC11.33□□□□□ -0.6
P04224 AC131997.1-201ENSMUST00000228611 1229 ntBASIC11.33□□□□□ -0.6
P04224 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
P04224 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
P04224 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
P04224 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
P04224 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
P04224 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
P04224 Gm43721-201ENSMUST00000199677 2313 ntBASIC11.33□□□□□ -0.6
P04224 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
P04224 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
P04224 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
P04224 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
P04224 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
P04224 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
P04224 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
P04224 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
P04224 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
P04224 AC124751.1-201ENSMUST00000222716 1408 ntBASIC11.33□□□□□ -0.6
P04224 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
P04224 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
P04224 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
P04224 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
P04224 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
P04224 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
P04224 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
P04224 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
P04224 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
P04224 AC154404.1-201ENSMUST00000223601 2077 ntBASIC11.32□□□□□ -0.6
P04224 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC11.32□□□□□ -0.6
P04224 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P04224 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
P04224 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
P04224 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
P04224 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P04224 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
P04224 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P04224 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
P04224 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P04224 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
P04224 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC11.32□□□□□ -0.6
P04224 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
P04224 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
P04224 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
P04224 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P04224 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
P04224 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
P04224 Gm15678-201ENSMUST00000117573 960 ntBASIC11.32□□□□□ -0.6
P04224 Gm12428-201ENSMUST00000119844 727 ntBASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms