Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
H3f3cP02301 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC11.09□□□□□ -0.63
H3f3cP02301 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC11.09□□□□□ -0.63
H3f3cP02301 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
H3f3cP02301 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
H3f3cP02301 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC11.09□□□□□ -0.63
H3f3cP02301 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
H3f3cP02301 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
H3f3cP02301 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
H3f3cP02301 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
H3f3cP02301 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
H3f3cP02301 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
H3f3cP02301 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
H3f3cP02301 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
H3f3cP02301 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
H3f3cP02301 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
H3f3cP02301 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC11.09□□□□□ -0.63
H3f3cP02301 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
H3f3cP02301 Gm8131-201ENSMUST00000213783 1570 ntBASIC11.09□□□□□ -0.63
H3f3cP02301 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
H3f3cP02301 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
H3f3cP02301 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
H3f3cP02301 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC11.09□□□□□ -0.63
H3f3cP02301 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
H3f3cP02301 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
H3f3cP02301 Gm37497-201ENSMUST00000195830 798 ntBASIC11.09□□□□□ -0.63
H3f3cP02301 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
H3f3cP02301 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC11.09□□□□□ -0.63
H3f3cP02301 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
H3f3cP02301 Gm2824-203ENSMUST00000226189 1228 ntBASIC11.09□□□□□ -0.63
H3f3cP02301 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
H3f3cP02301 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
H3f3cP02301 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
H3f3cP02301 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
H3f3cP02301 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
H3f3cP02301 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
H3f3cP02301 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
H3f3cP02301 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC11.09□□□□□ -0.63
H3f3cP02301 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
H3f3cP02301 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
H3f3cP02301 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
H3f3cP02301 Gm42706-201ENSMUST00000199733 1910 ntBASIC11.09□□□□□ -0.63
H3f3cP02301 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
H3f3cP02301 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
H3f3cP02301 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
H3f3cP02301 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
H3f3cP02301 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC11.09□□□□□ -0.63
H3f3cP02301 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
H3f3cP02301 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
H3f3cP02301 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
H3f3cP02301 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
H3f3cP02301 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC11.09□□□□□ -0.63
H3f3cP02301 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
H3f3cP02301 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.63
H3f3cP02301 AC154747.3-201ENSMUST00000224471 3470 ntBASIC11.08□□□□□ -0.64
H3f3cP02301 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
H3f3cP02301 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
H3f3cP02301 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
H3f3cP02301 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
H3f3cP02301 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
H3f3cP02301 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
H3f3cP02301 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
H3f3cP02301 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
H3f3cP02301 Gm44891-201ENSMUST00000208817 2223 ntBASIC11.08□□□□□ -0.64
H3f3cP02301 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
H3f3cP02301 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
H3f3cP02301 Gm45684-201ENSMUST00000210244 1571 ntBASIC11.08□□□□□ -0.64
H3f3cP02301 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
H3f3cP02301 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
H3f3cP02301 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
H3f3cP02301 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
H3f3cP02301 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC11.08□□□□□ -0.64
H3f3cP02301 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC11.08□□□□□ -0.64
H3f3cP02301 Gm24644-201ENSMUST00000157114 139 ntBASIC11.08□□□□□ -0.64
H3f3cP02301 Gm22331-201ENSMUST00000158066 136 ntBASIC11.08□□□□□ -0.64
H3f3cP02301 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
H3f3cP02301 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC11.08□□□□□ -0.64
H3f3cP02301 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC11.08□□□□□ -0.64
H3f3cP02301 Gm8602-201ENSMUST00000184045 607 ntBASIC11.08□□□□□ -0.64
H3f3cP02301 Gm29649-201ENSMUST00000185649 419 ntBASIC11.08□□□□□ -0.64
H3f3cP02301 Gm42442-201ENSMUST00000197951 1133 ntBASIC11.08□□□□□ -0.64
H3f3cP02301 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC11.08□□□□□ -0.64
H3f3cP02301 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC11.08□□□□□ -0.64
H3f3cP02301 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC11.08□□□□□ -0.64
H3f3cP02301 AC155237.1-201ENSMUST00000226196 1279 ntBASIC11.08□□□□□ -0.64
H3f3cP02301 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC11.08□□□□□ -0.64
H3f3cP02301 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
H3f3cP02301 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
H3f3cP02301 Gm6091-201ENSMUST00000098307 165 ntBASIC11.08□□□□□ -0.64
H3f3cP02301 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC11.08□□□□□ -0.64
H3f3cP02301 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
H3f3cP02301 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
H3f3cP02301 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
H3f3cP02301 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
H3f3cP02301 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
H3f3cP02301 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
H3f3cP02301 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC11.08□□□□□ -0.64
H3f3cP02301 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC11.08□□□□□ -0.64
H3f3cP02301 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
H3f3cP02301 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms