Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
P01852 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
P01852 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
P01852 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
P01852 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
P01852 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
P01852 Gm43677-201ENSMUST00000198098 2378 ntBASIC11.82□□□□□ -0.52
P01852 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
P01852 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P01852 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC11.81□□□□□ -0.52
P01852 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
P01852 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
P01852 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
P01852 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P01852 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC11.81□□□□□ -0.52
P01852 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P01852 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P01852 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
P01852 Gm5466-201ENSMUST00000119395 1890 ntBASIC11.81□□□□□ -0.52
P01852 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P01852 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
P01852 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P01852 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC11.81□□□□□ -0.52
P01852 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
P01852 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC11.81□□□□□ -0.52
P01852 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC11.81□□□□□ -0.52
P01852 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC11.81□□□□□ -0.52
P01852 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
P01852 Gm26927-201ENSMUST00000182385 965 ntBASIC11.81□□□□□ -0.52
P01852 AY702102-202ENSMUST00000194651 1173 ntBASIC11.81□□□□□ -0.52
P01852 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P01852 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
P01852 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
P01852 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC11.81□□□□□ -0.52
P01852 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
P01852 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
P01852 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P01852 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P01852 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
P01852 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P01852 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
P01852 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
P01852 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
P01852 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P01852 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
P01852 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
P01852 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
P01852 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P01852 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
P01852 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P01852 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
P01852 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
P01852 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
P01852 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
P01852 AC155298.2-201ENSMUST00000225485 6226 ntBASIC11.8□□□□□ -0.52
P01852 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
P01852 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
P01852 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
P01852 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC11.8□□□□□ -0.52
P01852 Gm10176-201ENSMUST00000159707 2264 ntBASIC11.8□□□□□ -0.52
P01852 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
P01852 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
P01852 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
P01852 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC11.8□□□□□ -0.52
P01852 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
P01852 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC11.8□□□□□ -0.52
P01852 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
P01852 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
P01852 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
P01852 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
P01852 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC11.8□□□□□ -0.52
P01852 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
P01852 Gm12539-201ENSMUST00000121549 1098 ntBASIC11.8□□□□□ -0.52
P01852 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC11.8□□□□□ -0.52
P01852 Mir7085-201ENSMUST00000184353 66 ntBASIC11.8□□□□□ -0.52
P01852 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC11.8□□□□□ -0.52
P01852 Gm38297-201ENSMUST00000195122 1057 ntBASIC11.8□□□□□ -0.52
P01852 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC11.8□□□□□ -0.52
P01852 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
P01852 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC11.8□□□□□ -0.52
P01852 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
P01852 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC11.8□□□□□ -0.52
P01852 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
P01852 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
P01852 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC11.8□□□□□ -0.52
P01852 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
P01852 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
P01852 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
P01852 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
P01852 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
P01852 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
P01852 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
P01852 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
P01852 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
P01852 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
P01852 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
P01852 Gm10339-203ENSMUST00000225409 1671 ntBASIC11.8□□□□□ -0.52
P01852 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
P01852 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
P01852 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms