Protein–RNA interactions for Protein: P01572

Ifna1, Interferon alpha-1, mousemouse

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ifna1P01572 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ifna1P01572 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ifna1P01572 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ifna1P01572 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ifna1P01572 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Ifna1P01572 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ifna1P01572 Gm13453-201ENSMUST00000118708 357 ntBASIC10.88□□□□□ -0.67
Ifna1P01572 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC10.88□□□□□ -0.67
Ifna1P01572 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Ifna1P01572 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ifna1P01572 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
Ifna1P01572 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Ifna1P01572 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ifna1P01572 Gm22175-201ENSMUST00000175007 78 ntBASIC10.88□□□□□ -0.67
Ifna1P01572 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ifna1P01572 Gm2756-201ENSMUST00000195851 400 ntBASIC10.88□□□□□ -0.67
Ifna1P01572 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ifna1P01572 Gm43094-201ENSMUST00000196549 921 ntBASIC10.88□□□□□ -0.67
Ifna1P01572 Gm2213-201ENSMUST00000197485 688 ntBASIC10.88□□□□□ -0.67
Ifna1P01572 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ifna1P01572 AC165157.4-201ENSMUST00000220587 139 ntBASIC10.88□□□□□ -0.67
Ifna1P01572 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ifna1P01572 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ifna1P01572 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ifna1P01572 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ifna1P01572 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC10.88□□□□□ -0.67
Ifna1P01572 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ifna1P01572 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Ifna1P01572 Gm42840-201ENSMUST00000200303 2251 ntBASIC10.88□□□□□ -0.67
Ifna1P01572 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Ifna1P01572 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ifna1P01572 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ifna1P01572 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Ifna1P01572 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ifna1P01572 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ifna1P01572 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ifna1P01572 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ifna1P01572 CT009757.3-201ENSMUST00000223367 2320 ntBASIC10.87□□□□□ -0.67
Ifna1P01572 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ifna1P01572 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ifna1P01572 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ifna1P01572 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ifna1P01572 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ifna1P01572 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC10.87□□□□□ -0.67
Ifna1P01572 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ifna1P01572 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ifna1P01572 Gm15222-202ENSMUST00000228667 1726 ntBASIC10.87□□□□□ -0.67
Ifna1P01572 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ifna1P01572 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Ifna1P01572 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ifna1P01572 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ifna1P01572 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ifna1P01572 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Ifna1P01572 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ifna1P01572 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ifna1P01572 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Ifna1P01572 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ifna1P01572 Gm11400-201ENSMUST00000120853 1214 ntBASIC10.87□□□□□ -0.67
Ifna1P01572 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC10.87□□□□□ -0.67
Ifna1P01572 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC10.87□□□□□ -0.67
Ifna1P01572 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ifna1P01572 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC10.87□□□□□ -0.67
Ifna1P01572 AC073947.2-201ENSMUST00000215888 1130 ntBASIC10.87□□□□□ -0.67
Ifna1P01572 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC10.87□□□□□ -0.67
Ifna1P01572 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ifna1P01572 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ifna1P01572 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ifna1P01572 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ifna1P01572 Gm8396-201ENSMUST00000057361 823 ntBASIC10.87□□□□□ -0.67
Ifna1P01572 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Ifna1P01572 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ifna1P01572 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ifna1P01572 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Ifna1P01572 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ifna1P01572 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ifna1P01572 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ifna1P01572 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ifna1P01572 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ifna1P01572 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Ifna1P01572 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC10.87□□□□□ -0.67
Ifna1P01572 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC10.87□□□□□ -0.67
Ifna1P01572 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Ifna1P01572 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
Ifna1P01572 Rab3c-202ENSMUST00000223922 2398 ntBASIC10.87□□□□□ -0.67
Ifna1P01572 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ifna1P01572 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ifna1P01572 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ifna1P01572 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ifna1P01572 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Ifna1P01572 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ifna1P01572 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ifna1P01572 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC10.86□□□□□ -0.67
Ifna1P01572 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ifna1P01572 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Ifna1P01572 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Ifna1P01572 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ifna1P01572 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ifna1P01572 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC10.86□□□□□ -0.67
Ifna1P01572 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC10.86□□□□□ -0.67
Ifna1P01572 Gm43514-201ENSMUST00000198852 424 ntBASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms