Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cops4O88544 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cops4O88544 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cops4O88544 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cops4O88544 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cops4O88544 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Cops4O88544 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Cops4O88544 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cops4O88544 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cops4O88544 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC11.92□□□□□ -0.5
Cops4O88544 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cops4O88544 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cops4O88544 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cops4O88544 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC11.91□□□□□ -0.5
Cops4O88544 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cops4O88544 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cops4O88544 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Cops4O88544 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cops4O88544 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cops4O88544 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cops4O88544 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Cops4O88544 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.91□□□□□ -0.5
Cops4O88544 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Cops4O88544 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cops4O88544 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cops4O88544 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cops4O88544 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cops4O88544 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC11.91□□□□□ -0.5
Cops4O88544 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cops4O88544 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cops4O88544 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cops4O88544 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cops4O88544 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cops4O88544 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cops4O88544 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cops4O88544 Gm13886-201ENSMUST00000117876 1183 ntBASIC11.91□□□□□ -0.5
Cops4O88544 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC11.91□□□□□ -0.5
Cops4O88544 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cops4O88544 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Cops4O88544 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC11.91□□□□□ -0.5
Cops4O88544 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC11.91□□□□□ -0.5
Cops4O88544 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cops4O88544 AC126408.1-201ENSMUST00000225184 523 ntBASIC11.91□□□□□ -0.5
Cops4O88544 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cops4O88544 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cops4O88544 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cops4O88544 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cops4O88544 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cops4O88544 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Cops4O88544 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cops4O88544 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cops4O88544 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cops4O88544 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.91□□□□□ -0.5
Cops4O88544 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cops4O88544 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Cops4O88544 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC11.91□□□□□ -0.5
Cops4O88544 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cops4O88544 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cops4O88544 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cops4O88544 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cops4O88544 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cops4O88544 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cops4O88544 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cops4O88544 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Cops4O88544 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.9□□□□□ -0.5
Cops4O88544 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC11.9□□□□□ -0.5
Cops4O88544 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cops4O88544 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cops4O88544 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cops4O88544 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cops4O88544 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cops4O88544 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.9□□□□□ -0.5
Cops4O88544 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cops4O88544 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cops4O88544 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cops4O88544 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cops4O88544 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cops4O88544 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cops4O88544 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.9□□□□□ -0.5
Cops4O88544 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Cops4O88544 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cops4O88544 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cops4O88544 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cops4O88544 Gm9063-201ENSMUST00000223299 582 ntBASIC11.9□□□□□ -0.5
Cops4O88544 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cops4O88544 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Cops4O88544 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC11.9□□□□□ -0.5
Cops4O88544 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC11.9□□□□□ -0.5
Cops4O88544 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cops4O88544 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cops4O88544 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cops4O88544 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cops4O88544 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cops4O88544 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.51
Cops4O88544 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Cops4O88544 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Cops4O88544 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Cops4O88544 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Cops4O88544 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.51
Cops4O88544 Daam2-202ENSMUST00000224595 1926 ntBASIC11.9□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms