Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Pdlim1O70400 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Pdlim1O70400 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pdlim1O70400 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.36
Pdlim1O70400 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pdlim1O70400 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pdlim1O70400 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pdlim1O70400 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Pdlim1O70400 Snord83b-201ENSMUST00000104546 94 ntBASIC12.77□□□□□ -0.37
Pdlim1O70400 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Pdlim1O70400 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.77□□□□□ -0.37
Pdlim1O70400 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.77□□□□□ -0.37
Pdlim1O70400 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pdlim1O70400 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pdlim1O70400 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.77□□□□□ -0.37
Pdlim1O70400 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pdlim1O70400 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pdlim1O70400 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pdlim1O70400 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pdlim1O70400 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pdlim1O70400 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pdlim1O70400 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pdlim1O70400 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pdlim1O70400 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Pdlim1O70400 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.77□□□□□ -0.37
Pdlim1O70400 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pdlim1O70400 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pdlim1O70400 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Pdlim1O70400 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pdlim1O70400 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pdlim1O70400 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pdlim1O70400 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pdlim1O70400 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pdlim1O70400 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pdlim1O70400 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pdlim1O70400 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.76□□□□□ -0.37
Pdlim1O70400 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pdlim1O70400 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pdlim1O70400 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pdlim1O70400 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pdlim1O70400 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.76□□□□□ -0.37
Pdlim1O70400 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pdlim1O70400 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pdlim1O70400 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC12.76□□□□□ -0.37
Pdlim1O70400 Gm14127-201ENSMUST00000117906 678 ntBASIC12.76□□□□□ -0.37
Pdlim1O70400 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.76□□□□□ -0.37
Pdlim1O70400 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pdlim1O70400 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pdlim1O70400 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC12.76□□□□□ -0.37
Pdlim1O70400 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.76□□□□□ -0.37
Pdlim1O70400 AY702102-202ENSMUST00000194651 1173 ntBASIC12.76□□□□□ -0.37
Pdlim1O70400 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.76□□□□□ -0.37
Pdlim1O70400 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.76□□□□□ -0.37
Pdlim1O70400 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.76□□□□□ -0.37
Pdlim1O70400 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Pdlim1O70400 Mir339-201ENSMUST00000083659 96 ntBASIC12.76□□□□□ -0.37
Pdlim1O70400 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pdlim1O70400 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pdlim1O70400 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.76□□□□□ -0.37
Pdlim1O70400 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pdlim1O70400 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pdlim1O70400 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pdlim1O70400 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pdlim1O70400 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pdlim1O70400 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pdlim1O70400 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pdlim1O70400 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Pdlim1O70400 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pdlim1O70400 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pdlim1O70400 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pdlim1O70400 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pdlim1O70400 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pdlim1O70400 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pdlim1O70400 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.75□□□□□ -0.37
Pdlim1O70400 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pdlim1O70400 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pdlim1O70400 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pdlim1O70400 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pdlim1O70400 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pdlim1O70400 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Pdlim1O70400 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pdlim1O70400 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Pdlim1O70400 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pdlim1O70400 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.75□□□□□ -0.37
Pdlim1O70400 Gm16379-201ENSMUST00000161469 348 ntBASIC12.75□□□□□ -0.37
Pdlim1O70400 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pdlim1O70400 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.75□□□□□ -0.37
Pdlim1O70400 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Pdlim1O70400 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Pdlim1O70400 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.75□□□□□ -0.37
Pdlim1O70400 Gm27514-201ENSMUST00000183692 110 ntBASIC12.75□□□□□ -0.37
Pdlim1O70400 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pdlim1O70400 Gm8762-201ENSMUST00000193486 339 ntBASIC12.75□□□□□ -0.37
Pdlim1O70400 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.75□□□□□ -0.37
Pdlim1O70400 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Pdlim1O70400 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.75□□□□□ -0.37
Pdlim1O70400 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.75□□□□□ -0.37
Pdlim1O70400 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pdlim1O70400 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pdlim1O70400 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms