Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trdmt1O55055 Gm44094-201ENSMUST00000204703 2030 ntBASIC14.16□□□□□ -0.14
Trdmt1O55055 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC14.16□□□□□ -0.14
Trdmt1O55055 Gm6963-201ENSMUST00000147879 379 ntBASIC14.16□□□□□ -0.14
Trdmt1O55055 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trdmt1O55055 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trdmt1O55055 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC14.16□□□□□ -0.14
Trdmt1O55055 Gm42997-202ENSMUST00000200321 985 ntBASIC14.16□□□□□ -0.14
Trdmt1O55055 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trdmt1O55055 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trdmt1O55055 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Trdmt1O55055 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Trdmt1O55055 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trdmt1O55055 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC14.16□□□□□ -0.14
Trdmt1O55055 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trdmt1O55055 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trdmt1O55055 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trdmt1O55055 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trdmt1O55055 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trdmt1O55055 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
Trdmt1O55055 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trdmt1O55055 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trdmt1O55055 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
Trdmt1O55055 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trdmt1O55055 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Trdmt1O55055 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trdmt1O55055 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC14.16□□□□□ -0.14
Trdmt1O55055 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trdmt1O55055 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trdmt1O55055 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trdmt1O55055 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC14.15□□□□□ -0.14
Trdmt1O55055 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trdmt1O55055 AC122314.1-201ENSMUST00000223056 2239 ntBASIC14.15□□□□□ -0.14
Trdmt1O55055 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC14.15□□□□□ -0.14
Trdmt1O55055 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trdmt1O55055 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trdmt1O55055 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trdmt1O55055 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trdmt1O55055 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trdmt1O55055 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC14.15□□□□□ -0.14
Trdmt1O55055 Gm8798-201ENSMUST00000211877 1661 ntBASIC14.15□□□□□ -0.14
Trdmt1O55055 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trdmt1O55055 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trdmt1O55055 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trdmt1O55055 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trdmt1O55055 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trdmt1O55055 Gm13813-201ENSMUST00000120998 787 ntBASIC14.15□□□□□ -0.14
Trdmt1O55055 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC14.15□□□□□ -0.14
Trdmt1O55055 Gm5070-201ENSMUST00000177599 862 ntBASIC14.15□□□□□ -0.14
Trdmt1O55055 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC14.15□□□□□ -0.14
Trdmt1O55055 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC14.15□□□□□ -0.14
Trdmt1O55055 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trdmt1O55055 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trdmt1O55055 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC14.15□□□□□ -0.14
Trdmt1O55055 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC14.15□□□□□ -0.14
Trdmt1O55055 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trdmt1O55055 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Trdmt1O55055 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trdmt1O55055 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trdmt1O55055 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.15□□□□□ -0.15
Trdmt1O55055 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Trdmt1O55055 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.15□□□□□ -0.15
Trdmt1O55055 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trdmt1O55055 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trdmt1O55055 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trdmt1O55055 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trdmt1O55055 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC14.14□□□□□ -0.15
Trdmt1O55055 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trdmt1O55055 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
Trdmt1O55055 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC14.14□□□□□ -0.15
Trdmt1O55055 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Trdmt1O55055 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trdmt1O55055 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trdmt1O55055 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trdmt1O55055 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trdmt1O55055 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
Trdmt1O55055 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC14.14□□□□□ -0.15
Trdmt1O55055 Gm12015-201ENSMUST00000117065 843 ntBASIC14.14□□□□□ -0.15
Trdmt1O55055 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC14.14□□□□□ -0.15
Trdmt1O55055 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
Trdmt1O55055 Gm13315-201ENSMUST00000120376 991 ntBASIC14.14□□□□□ -0.15
Trdmt1O55055 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trdmt1O55055 Gm28882-201ENSMUST00000185504 314 ntBASIC14.14□□□□□ -0.15
Trdmt1O55055 Ighv5-7-201ENSMUST00000192302 244 ntBASIC14.14□□□□□ -0.15
Trdmt1O55055 Gm7003-201ENSMUST00000195089 312 ntBASIC14.14□□□□□ -0.15
Trdmt1O55055 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC14.14□□□□□ -0.15
Trdmt1O55055 Gm45433-201ENSMUST00000209386 247 ntBASIC14.14□□□□□ -0.15
Trdmt1O55055 Gm39404-201ENSMUST00000216350 313 ntBASIC14.14□□□□□ -0.15
Trdmt1O55055 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC14.14□□□□□ -0.15
Trdmt1O55055 CT025694.1-201ENSMUST00000226188 934 ntBASIC14.14□□□□□ -0.15
Trdmt1O55055 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trdmt1O55055 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trdmt1O55055 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trdmt1O55055 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trdmt1O55055 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trdmt1O55055 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trdmt1O55055 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trdmt1O55055 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trdmt1O55055 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trdmt1O55055 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms