Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Shisa8J3QNX5 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Shisa8J3QNX5 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Shisa8J3QNX5 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Shisa8J3QNX5 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Shisa8J3QNX5 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC11.76□□□□□ -0.53
Shisa8J3QNX5 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Shisa8J3QNX5 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Shisa8J3QNX5 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Shisa8J3QNX5 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Shisa8J3QNX5 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
Shisa8J3QNX5 Gm6447-201ENSMUST00000118905 835 ntBASIC11.76□□□□□ -0.53
Shisa8J3QNX5 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Shisa8J3QNX5 Gm11400-201ENSMUST00000120853 1214 ntBASIC11.76□□□□□ -0.53
Shisa8J3QNX5 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Shisa8J3QNX5 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Shisa8J3QNX5 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC11.76□□□□□ -0.53
Shisa8J3QNX5 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Shisa8J3QNX5 Gm43094-201ENSMUST00000196549 921 ntBASIC11.76□□□□□ -0.53
Shisa8J3QNX5 AC151286.1-201ENSMUST00000198489 145 ntBASIC11.76□□□□□ -0.53
Shisa8J3QNX5 AC073947.2-201ENSMUST00000215888 1130 ntBASIC11.76□□□□□ -0.53
Shisa8J3QNX5 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Shisa8J3QNX5 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Shisa8J3QNX5 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC11.76□□□□□ -0.53
Shisa8J3QNX5 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Shisa8J3QNX5 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Shisa8J3QNX5 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Shisa8J3QNX5 Fgf17-202ENSMUST00000227123 1336 ntBASIC11.76□□□□□ -0.53
Shisa8J3QNX5 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Shisa8J3QNX5 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Shisa8J3QNX5 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Shisa8J3QNX5 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Shisa8J3QNX5 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Shisa8J3QNX5 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Shisa8J3QNX5 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Shisa8J3QNX5 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC11.76□□□□□ -0.53
Shisa8J3QNX5 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Shisa8J3QNX5 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Shisa8J3QNX5 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.75□□□□□ -0.53
Shisa8J3QNX5 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Shisa8J3QNX5 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Shisa8J3QNX5 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Shisa8J3QNX5 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC11.75□□□□□ -0.53
Shisa8J3QNX5 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Shisa8J3QNX5 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Shisa8J3QNX5 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Shisa8J3QNX5 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Shisa8J3QNX5 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
Shisa8J3QNX5 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Shisa8J3QNX5 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.75□□□□□ -0.53
Shisa8J3QNX5 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Shisa8J3QNX5 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Shisa8J3QNX5 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Shisa8J3QNX5 Gm13223-201ENSMUST00000118609 747 ntBASIC11.75□□□□□ -0.53
Shisa8J3QNX5 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC11.75□□□□□ -0.53
Shisa8J3QNX5 Gm22175-201ENSMUST00000175007 78 ntBASIC11.75□□□□□ -0.53
Shisa8J3QNX5 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Shisa8J3QNX5 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Shisa8J3QNX5 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC11.75□□□□□ -0.53
Shisa8J3QNX5 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Shisa8J3QNX5 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Shisa8J3QNX5 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11.75□□□□□ -0.53
Shisa8J3QNX5 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Shisa8J3QNX5 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Shisa8J3QNX5 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Shisa8J3QNX5 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Shisa8J3QNX5 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Shisa8J3QNX5 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Shisa8J3QNX5 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Shisa8J3QNX5 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Shisa8J3QNX5 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Shisa8J3QNX5 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Shisa8J3QNX5 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC11.75□□□□□ -0.53
Shisa8J3QNX5 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Shisa8J3QNX5 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Shisa8J3QNX5 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Shisa8J3QNX5 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Shisa8J3QNX5 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Shisa8J3QNX5 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Shisa8J3QNX5 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Shisa8J3QNX5 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Shisa8J3QNX5 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Shisa8J3QNX5 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Shisa8J3QNX5 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Shisa8J3QNX5 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Shisa8J3QNX5 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Shisa8J3QNX5 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC11.74□□□□□ -0.53
Shisa8J3QNX5 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
Shisa8J3QNX5 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Shisa8J3QNX5 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC11.74□□□□□ -0.53
Shisa8J3QNX5 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Shisa8J3QNX5 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Shisa8J3QNX5 Gm9063-201ENSMUST00000223299 582 ntBASIC11.74□□□□□ -0.53
Shisa8J3QNX5 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Shisa8J3QNX5 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Shisa8J3QNX5 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Shisa8J3QNX5 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Shisa8J3QNX5 AC096628.2-201ENSMUST00000225443 1413 ntBASIC11.74□□□□□ -0.53
Shisa8J3QNX5 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Shisa8J3QNX5 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms