Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Trim55G3X8Y1 Gm24245-201ENSMUST00000157318 57 ntBASIC13.24□□□□□ -0.29
Trim55G3X8Y1 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC13.24□□□□□ -0.29
Trim55G3X8Y1 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.24□□□□□ -0.29
Trim55G3X8Y1 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC13.24□□□□□ -0.29
Trim55G3X8Y1 Gm29741-201ENSMUST00000192667 421 ntBASIC13.24□□□□□ -0.29
Trim55G3X8Y1 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC13.24□□□□□ -0.29
Trim55G3X8Y1 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.24□□□□□ -0.29
Trim55G3X8Y1 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim55G3X8Y1 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim55G3X8Y1 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim55G3X8Y1 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim55G3X8Y1 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim55G3X8Y1 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Trim55G3X8Y1 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim55G3X8Y1 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim55G3X8Y1 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim55G3X8Y1 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim55G3X8Y1 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim55G3X8Y1 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC13.24□□□□□ -0.29
Trim55G3X8Y1 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim55G3X8Y1 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim55G3X8Y1 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim55G3X8Y1 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim55G3X8Y1 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim55G3X8Y1 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim55G3X8Y1 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim55G3X8Y1 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim55G3X8Y1 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim55G3X8Y1 Gm29100-201ENSMUST00000187564 4410 ntBASIC13.23□□□□□ -0.29
Trim55G3X8Y1 CT025626.1-201ENSMUST00000223735 1455 ntBASIC13.23□□□□□ -0.29
Trim55G3X8Y1 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim55G3X8Y1 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC13.23□□□□□ -0.29
Trim55G3X8Y1 CT025681.1-201ENSMUST00000225453 1855 ntBASIC13.23□□□□□ -0.29
Trim55G3X8Y1 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim55G3X8Y1 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trim55G3X8Y1 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim55G3X8Y1 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim55G3X8Y1 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim55G3X8Y1 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trim55G3X8Y1 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim55G3X8Y1 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim55G3X8Y1 Gm4995-201ENSMUST00000117247 432 ntBASIC13.23□□□□□ -0.29
Trim55G3X8Y1 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC13.23□□□□□ -0.29
Trim55G3X8Y1 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim55G3X8Y1 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC13.23□□□□□ -0.29
Trim55G3X8Y1 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim55G3X8Y1 AC093022.5-201ENSMUST00000226841 1079 ntBASIC13.23□□□□□ -0.29
Trim55G3X8Y1 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim55G3X8Y1 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim55G3X8Y1 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim55G3X8Y1 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim55G3X8Y1 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim55G3X8Y1 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim55G3X8Y1 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim55G3X8Y1 Gm14452-201ENSMUST00000118680 1632 ntBASIC13.23□□□□□ -0.29
Trim55G3X8Y1 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim55G3X8Y1 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim55G3X8Y1 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim55G3X8Y1 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim55G3X8Y1 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim55G3X8Y1 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC13.23□□□□□ -0.29
Trim55G3X8Y1 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim55G3X8Y1 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim55G3X8Y1 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim55G3X8Y1 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim55G3X8Y1 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim55G3X8Y1 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim55G3X8Y1 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC13.22□□□□□ -0.29
Trim55G3X8Y1 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Trim55G3X8Y1 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim55G3X8Y1 Gm17244-201ENSMUST00000192482 3416 ntBASIC13.22□□□□□ -0.29
Trim55G3X8Y1 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC13.22□□□□□ -0.29
Trim55G3X8Y1 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim55G3X8Y1 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim55G3X8Y1 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC13.22□□□□□ -0.29
Trim55G3X8Y1 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim55G3X8Y1 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC13.22□□□□□ -0.29
Trim55G3X8Y1 Mir874-201ENSMUST00000104769 76 ntBASIC13.22□□□□□ -0.29
Trim55G3X8Y1 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
Trim55G3X8Y1 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC13.22□□□□□ -0.29
Trim55G3X8Y1 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim55G3X8Y1 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.22□□□□□ -0.29
Trim55G3X8Y1 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC13.22□□□□□ -0.29
Trim55G3X8Y1 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim55G3X8Y1 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim55G3X8Y1 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim55G3X8Y1 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim55G3X8Y1 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Trim55G3X8Y1 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim55G3X8Y1 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Trim55G3X8Y1 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim55G3X8Y1 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim55G3X8Y1 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Trim55G3X8Y1 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim55G3X8Y1 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim55G3X8Y1 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim55G3X8Y1 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
Trim55G3X8Y1 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim55G3X8Y1 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 202.2 ms