Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Gm42872-201ENSMUST00000200026 1967 ntBASIC15.51■□□□□ 0.07
NpcdF8VQB8 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC15.51■□□□□ 0.07
NpcdF8VQB8 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
NpcdF8VQB8 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NpcdF8VQB8 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
NpcdF8VQB8 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NpcdF8VQB8 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
NpcdF8VQB8 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NpcdF8VQB8 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC15.5■□□□□ 0.07
NpcdF8VQB8 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NpcdF8VQB8 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC15.5■□□□□ 0.07
NpcdF8VQB8 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NpcdF8VQB8 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
NpcdF8VQB8 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
NpcdF8VQB8 Gm13492-201ENSMUST00000119772 665 ntBASIC15.5■□□□□ 0.07
NpcdF8VQB8 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC15.5■□□□□ 0.07
NpcdF8VQB8 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC15.5■□□□□ 0.07
NpcdF8VQB8 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NpcdF8VQB8 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NpcdF8VQB8 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC15.5■□□□□ 0.07
NpcdF8VQB8 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NpcdF8VQB8 Gm44772-201ENSMUST00000207623 1191 ntBASIC15.5■□□□□ 0.07
NpcdF8VQB8 CT025551.1-201ENSMUST00000223996 692 ntBASIC15.5■□□□□ 0.07
NpcdF8VQB8 Ntng1-201ENSMUST00000051253 327 ntBASIC15.5■□□□□ 0.07
NpcdF8VQB8 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
NpcdF8VQB8 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NpcdF8VQB8 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
NpcdF8VQB8 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
NpcdF8VQB8 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NpcdF8VQB8 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NpcdF8VQB8 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NpcdF8VQB8 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NpcdF8VQB8 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NpcdF8VQB8 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NpcdF8VQB8 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NpcdF8VQB8 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NpcdF8VQB8 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NpcdF8VQB8 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NpcdF8VQB8 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NpcdF8VQB8 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NpcdF8VQB8 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
NpcdF8VQB8 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NpcdF8VQB8 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
NpcdF8VQB8 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
NpcdF8VQB8 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC15.49■□□□□ 0.07
NpcdF8VQB8 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
NpcdF8VQB8 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
NpcdF8VQB8 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NpcdF8VQB8 Gm16397-201ENSMUST00000122201 494 ntBASIC15.49■□□□□ 0.07
NpcdF8VQB8 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NpcdF8VQB8 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC15.49■□□□□ 0.07
NpcdF8VQB8 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
NpcdF8VQB8 Gm45691-201ENSMUST00000206905 1120 ntBASIC15.49■□□□□ 0.07
NpcdF8VQB8 Aprt-ps-201ENSMUST00000212311 505 ntBASIC15.49■□□□□ 0.07
NpcdF8VQB8 AC166095.1-201ENSMUST00000223731 1241 ntBASIC15.49■□□□□ 0.07
NpcdF8VQB8 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NpcdF8VQB8 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NpcdF8VQB8 Gm7789-202ENSMUST00000211273 1400 ntBASIC15.49■□□□□ 0.07
NpcdF8VQB8 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
NpcdF8VQB8 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
NpcdF8VQB8 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC15.49■□□□□ 0.07
NpcdF8VQB8 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC15.49■□□□□ 0.07
NpcdF8VQB8 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
NpcdF8VQB8 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
NpcdF8VQB8 Gm38157-201ENSMUST00000194178 1698 ntBASIC15.48■□□□□ 0.07
NpcdF8VQB8 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC15.48■□□□□ 0.07
NpcdF8VQB8 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
NpcdF8VQB8 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NpcdF8VQB8 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NpcdF8VQB8 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
NpcdF8VQB8 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
NpcdF8VQB8 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
NpcdF8VQB8 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
NpcdF8VQB8 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC15.48■□□□□ 0.07
NpcdF8VQB8 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC15.48■□□□□ 0.07
NpcdF8VQB8 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
NpcdF8VQB8 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC15.48■□□□□ 0.07
NpcdF8VQB8 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC15.48■□□□□ 0.07
NpcdF8VQB8 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC15.48■□□□□ 0.07
NpcdF8VQB8 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
NpcdF8VQB8 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
NpcdF8VQB8 AC135469.1-201ENSMUST00000225984 772 ntBASIC15.48■□□□□ 0.07
NpcdF8VQB8 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NpcdF8VQB8 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
NpcdF8VQB8 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
NpcdF8VQB8 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
NpcdF8VQB8 Matn2-206ENSMUST00000228570 2798 ntBASIC15.48■□□□□ 0.07
NpcdF8VQB8 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
NpcdF8VQB8 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
NpcdF8VQB8 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NpcdF8VQB8 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC15.48■□□□□ 0.07
NpcdF8VQB8 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NpcdF8VQB8 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NpcdF8VQB8 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NpcdF8VQB8 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NpcdF8VQB8 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
NpcdF8VQB8 Gm6580-201ENSMUST00000117504 1357 ntBASIC15.48■□□□□ 0.07
NpcdF8VQB8 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
NpcdF8VQB8 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
NpcdF8VQB8 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms