Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Herc1E9PZP8 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC6.98□□□□□ -1.29
Herc1E9PZP8 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Herc1E9PZP8 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Herc1E9PZP8 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC6.98□□□□□ -1.29
Herc1E9PZP8 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Herc1E9PZP8 Itpa-ps1-201ENSMUST00000117207 597 ntBASIC6.98□□□□□ -1.29
Herc1E9PZP8 Gm4943-201ENSMUST00000132879 424 ntBASIC6.98□□□□□ -1.29
Herc1E9PZP8 Gm15929-201ENSMUST00000138926 1161 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Herc1E9PZP8 3930402G23Rik-202ENSMUST00000208615 581 ntTSL 3 BASIC6.98□□□□□ -1.29
Herc1E9PZP8 1500002F19Rik-203ENSMUST00000211184 375 ntTSL 3 BASIC6.98□□□□□ -1.29
Herc1E9PZP8 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC6.98□□□□□ -1.29
Herc1E9PZP8 Fxyd1-201ENSMUST00000039909 620 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Herc1E9PZP8 Gm8186-201ENSMUST00000053575 386 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Herc1E9PZP8 Elobl-202ENSMUST00000082339 300 ntBASIC6.98□□□□□ -1.29
Herc1E9PZP8 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Herc1E9PZP8 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Herc1E9PZP8 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Herc1E9PZP8 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Herc1E9PZP8 Dedd-202ENSMUST00000097467 1606 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Herc1E9PZP8 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Herc1E9PZP8 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Herc1E9PZP8 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Herc1E9PZP8 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
Herc1E9PZP8 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Herc1E9PZP8 Gm9992-201ENSMUST00000070059 1593 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Herc1E9PZP8 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
Herc1E9PZP8 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
Herc1E9PZP8 Gm2244-201ENSMUST00000164372 1506 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Herc1E9PZP8 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
Herc1E9PZP8 Gm15489-201ENSMUST00000132811 973 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Herc1E9PZP8 Mir1941-201ENSMUST00000157834 83 ntBASIC6.98□□□□□ -1.29
Herc1E9PZP8 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Herc1E9PZP8 Gm17207-201ENSMUST00000168686 645 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Herc1E9PZP8 Cd9-ps-201ENSMUST00000174687 650 ntBASIC6.98□□□□□ -1.29
Herc1E9PZP8 Prr19-201ENSMUST00000080288 1240 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Herc1E9PZP8 Itpa-201ENSMUST00000103193 1390 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Herc1E9PZP8 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
Herc1E9PZP8 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Herc1E9PZP8 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Herc1E9PZP8 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC6.97□□□□□ -1.29
Herc1E9PZP8 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Herc1E9PZP8 Gm4900-201ENSMUST00000222046 1628 ntBASIC6.97□□□□□ -1.29
Herc1E9PZP8 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Herc1E9PZP8 Gm14052-201ENSMUST00000121434 1031 ntBASIC6.97□□□□□ -1.29
Herc1E9PZP8 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Herc1E9PZP8 Gm43966-201ENSMUST00000203301 612 ntBASIC6.97□□□□□ -1.29
Herc1E9PZP8 BC049987-201ENSMUST00000213859 918 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Herc1E9PZP8 Rpl9-201ENSMUST00000057885 738 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Herc1E9PZP8 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC6.97□□□□□ -1.29
Herc1E9PZP8 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Herc1E9PZP8 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
Herc1E9PZP8 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Herc1E9PZP8 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Herc1E9PZP8 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Herc1E9PZP8 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
Herc1E9PZP8 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Herc1E9PZP8 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Herc1E9PZP8 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Herc1E9PZP8 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC6.97□□□□□ -1.29
Herc1E9PZP8 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Herc1E9PZP8 Pvalb-202ENSMUST00000120592 953 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Herc1E9PZP8 1700017J07Rik-201ENSMUST00000140241 473 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Herc1E9PZP8 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC6.97□□□□□ -1.29
Herc1E9PZP8 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Herc1E9PZP8 Gm12407-201ENSMUST00000180219 324 ntBASIC6.97□□□□□ -1.29
Herc1E9PZP8 Gm6216-201ENSMUST00000182390 687 ntBASIC6.97□□□□□ -1.29
Herc1E9PZP8 Tpi-rs4-201ENSMUST00000213734 720 ntBASIC6.97□□□□□ -1.29
Herc1E9PZP8 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Herc1E9PZP8 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Herc1E9PZP8 Klk1b5-201ENSMUST00000074359 1391 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Herc1E9PZP8 Gm43267-201ENSMUST00000199664 1796 ntBASIC6.97□□□□□ -1.29
Herc1E9PZP8 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Herc1E9PZP8 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Herc1E9PZP8 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC6.97□□□□□ -1.29
Herc1E9PZP8 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Herc1E9PZP8 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Herc1E9PZP8 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
Herc1E9PZP8 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
Herc1E9PZP8 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Herc1E9PZP8 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC6.97□□□□□ -1.29
Herc1E9PZP8 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
Herc1E9PZP8 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
Herc1E9PZP8 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Herc1E9PZP8 Cd79b-202ENSMUST00000167143 1195 ntAPPRIS P2 TSL 1 (best) BASIC6.97□□□□□ -1.29
Herc1E9PZP8 Gm39091-201ENSMUST00000206189 553 ntTSL 2 BASIC6.97□□□□□ -1.29
Herc1E9PZP8 AC154347.2-201ENSMUST00000221223 715 ntTSL 3 BASIC6.97□□□□□ -1.29
Herc1E9PZP8 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC6.97□□□□□ -1.29
Herc1E9PZP8 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC6.97□□□□□ -1.29
Herc1E9PZP8 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC6.97□□□□□ -1.29
Herc1E9PZP8 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Herc1E9PZP8 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Herc1E9PZP8 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC6.96□□□□□ -1.29
Herc1E9PZP8 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC6.96□□□□□ -1.29
Herc1E9PZP8 Gm25830-201ENSMUST00000158923 132 ntBASIC6.96□□□□□ -1.29
Herc1E9PZP8 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC6.96□□□□□ -1.29
Herc1E9PZP8 4930444A19Rik-202ENSMUST00000190007 633 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
Herc1E9PZP8 Gm38297-201ENSMUST00000195122 1057 ntBASIC6.96□□□□□ -1.29
Herc1E9PZP8 Ptma-201ENSMUST00000045897 1216 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
Herc1E9PZP8 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC6.96□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms