Protein–RNA interactions for Protein: E9PZM7

Scaf11, SR-related CTD-associated factor 11, mousemouse

Known RBP Predictions only

Length 1,456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11E9PZM7 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Scaf11E9PZM7 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Scaf11E9PZM7 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scaf11E9PZM7 Gm18626-201ENSMUST00000221512 1409 ntBASIC17.7■□□□□ 0.42
Scaf11E9PZM7 Gm11451-201ENSMUST00000118946 630 ntBASIC17.7■□□□□ 0.42
Scaf11E9PZM7 Gm12969-201ENSMUST00000120199 1004 ntBASIC17.7■□□□□ 0.42
Scaf11E9PZM7 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Scaf11E9PZM7 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scaf11E9PZM7 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Scaf11E9PZM7 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scaf11E9PZM7 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Scaf11E9PZM7 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scaf11E9PZM7 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC17.7■□□□□ 0.42
Scaf11E9PZM7 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Scaf11E9PZM7 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC17.7■□□□□ 0.42
Scaf11E9PZM7 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scaf11E9PZM7 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scaf11E9PZM7 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Scaf11E9PZM7 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scaf11E9PZM7 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Scaf11E9PZM7 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scaf11E9PZM7 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scaf11E9PZM7 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scaf11E9PZM7 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Scaf11E9PZM7 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC17.69■□□□□ 0.42
Scaf11E9PZM7 Gng12-205ENSMUST00000114226 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scaf11E9PZM7 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC17.69■□□□□ 0.42
Scaf11E9PZM7 Gm11801-201ENSMUST00000117807 746 ntBASIC17.69■□□□□ 0.42
Scaf11E9PZM7 Mir1956-201ENSMUST00000157748 65 ntBASIC17.69■□□□□ 0.42
Scaf11E9PZM7 Mir7677-201ENSMUST00000184226 67 ntBASIC17.69■□□□□ 0.42
Scaf11E9PZM7 Gm17831-201ENSMUST00000205579 900 ntBASIC17.69■□□□□ 0.42
Scaf11E9PZM7 Gm6905-201ENSMUST00000205729 511 ntBASIC17.69■□□□□ 0.42
Scaf11E9PZM7 Gm45909-201ENSMUST00000212413 1031 ntBASIC17.69■□□□□ 0.42
Scaf11E9PZM7 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Scaf11E9PZM7 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scaf11E9PZM7 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scaf11E9PZM7 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scaf11E9PZM7 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scaf11E9PZM7 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.69■□□□□ 0.42
Scaf11E9PZM7 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scaf11E9PZM7 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scaf11E9PZM7 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scaf11E9PZM7 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Scaf11E9PZM7 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC17.69■□□□□ 0.42
Scaf11E9PZM7 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scaf11E9PZM7 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Scaf11E9PZM7 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scaf11E9PZM7 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Scaf11E9PZM7 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scaf11E9PZM7 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scaf11E9PZM7 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scaf11E9PZM7 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Scaf11E9PZM7 Gm14314-201ENSMUST00000118225 1015 ntBASIC17.69■□□□□ 0.42
Scaf11E9PZM7 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC17.69■□□□□ 0.42
Scaf11E9PZM7 Gm23085-201ENSMUST00000157849 293 ntBASIC17.69■□□□□ 0.42
Scaf11E9PZM7 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC17.69■□□□□ 0.42
Scaf11E9PZM7 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC17.69■□□□□ 0.42
Scaf11E9PZM7 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC17.69■□□□□ 0.42
Scaf11E9PZM7 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC17.69■□□□□ 0.42
Scaf11E9PZM7 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scaf11E9PZM7 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Scaf11E9PZM7 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scaf11E9PZM7 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scaf11E9PZM7 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scaf11E9PZM7 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scaf11E9PZM7 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scaf11E9PZM7 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Scaf11E9PZM7 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Scaf11E9PZM7 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC17.68■□□□□ 0.42
Scaf11E9PZM7 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scaf11E9PZM7 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scaf11E9PZM7 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scaf11E9PZM7 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scaf11E9PZM7 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scaf11E9PZM7 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.68■□□□□ 0.42
Scaf11E9PZM7 AC158355.1-201ENSMUST00000215895 1705 ntBASIC17.68■□□□□ 0.42
Scaf11E9PZM7 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scaf11E9PZM7 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Scaf11E9PZM7 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scaf11E9PZM7 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scaf11E9PZM7 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Scaf11E9PZM7 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC17.68■□□□□ 0.42
Scaf11E9PZM7 Gm13600-201ENSMUST00000117949 744 ntBASIC17.68■□□□□ 0.42
Scaf11E9PZM7 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC17.68■□□□□ 0.42
Scaf11E9PZM7 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC17.68■□□□□ 0.42
Scaf11E9PZM7 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scaf11E9PZM7 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Scaf11E9PZM7 Gm10731-201ENSMUST00000181171 448 ntBASIC17.68■□□□□ 0.42
Scaf11E9PZM7 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Scaf11E9PZM7 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
Scaf11E9PZM7 AC154252.2-201ENSMUST00000223593 767 ntBASIC17.68■□□□□ 0.42
Scaf11E9PZM7 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scaf11E9PZM7 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC17.68■□□□□ 0.42
Scaf11E9PZM7 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Scaf11E9PZM7 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Scaf11E9PZM7 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC17.67■□□□□ 0.42
Scaf11E9PZM7 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scaf11E9PZM7 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scaf11E9PZM7 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scaf11E9PZM7 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms