Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Srp54bE9PXC0 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Srp54bE9PXC0 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.73□□□□□ -0.37
Srp54bE9PXC0 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Srp54bE9PXC0 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Srp54bE9PXC0 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
Srp54bE9PXC0 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Srp54bE9PXC0 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Srp54bE9PXC0 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Srp54bE9PXC0 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Srp54bE9PXC0 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Srp54bE9PXC0 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Srp54bE9PXC0 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Srp54bE9PXC0 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.73□□□□□ -0.37
Srp54bE9PXC0 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Srp54bE9PXC0 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Srp54bE9PXC0 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.72□□□□□ -0.37
Srp54bE9PXC0 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Srp54bE9PXC0 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Srp54bE9PXC0 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Srp54bE9PXC0 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Srp54bE9PXC0 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Srp54bE9PXC0 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Srp54bE9PXC0 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.72□□□□□ -0.37
Srp54bE9PXC0 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Srp54bE9PXC0 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Srp54bE9PXC0 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Srp54bE9PXC0 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Srp54bE9PXC0 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Srp54bE9PXC0 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC12.72□□□□□ -0.37
Srp54bE9PXC0 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.72□□□□□ -0.37
Srp54bE9PXC0 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.72□□□□□ -0.37
Srp54bE9PXC0 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.72□□□□□ -0.37
Srp54bE9PXC0 Gm6082-201ENSMUST00000215204 454 ntBASIC12.72□□□□□ -0.37
Srp54bE9PXC0 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Srp54bE9PXC0 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Srp54bE9PXC0 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Srp54bE9PXC0 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Srp54bE9PXC0 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Srp54bE9PXC0 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Srp54bE9PXC0 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Srp54bE9PXC0 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Srp54bE9PXC0 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Srp54bE9PXC0 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.72□□□□□ -0.37
Srp54bE9PXC0 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Srp54bE9PXC0 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Srp54bE9PXC0 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Srp54bE9PXC0 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Srp54bE9PXC0 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Srp54bE9PXC0 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Srp54bE9PXC0 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Srp54bE9PXC0 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Srp54bE9PXC0 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Srp54bE9PXC0 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Srp54bE9PXC0 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.71□□□□□ -0.37
Srp54bE9PXC0 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.71□□□□□ -0.37
Srp54bE9PXC0 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Srp54bE9PXC0 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Srp54bE9PXC0 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Srp54bE9PXC0 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Srp54bE9PXC0 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.71□□□□□ -0.37
Srp54bE9PXC0 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
Srp54bE9PXC0 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Srp54bE9PXC0 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Srp54bE9PXC0 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Srp54bE9PXC0 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Srp54bE9PXC0 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Srp54bE9PXC0 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Srp54bE9PXC0 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Srp54bE9PXC0 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.71□□□□□ -0.37
Srp54bE9PXC0 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.71□□□□□ -0.37
Srp54bE9PXC0 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Srp54bE9PXC0 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC12.71□□□□□ -0.37
Srp54bE9PXC0 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.71□□□□□ -0.37
Srp54bE9PXC0 AC159747.1-201ENSMUST00000219903 265 ntBASIC12.71□□□□□ -0.37
Srp54bE9PXC0 Gm9176-201ENSMUST00000219955 1120 ntBASIC12.71□□□□□ -0.37
Srp54bE9PXC0 AC122371.3-201ENSMUST00000223402 1061 ntBASIC12.71□□□□□ -0.37
Srp54bE9PXC0 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Srp54bE9PXC0 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Srp54bE9PXC0 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.71□□□□□ -0.37
Srp54bE9PXC0 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Srp54bE9PXC0 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.71□□□□□ -0.37
Srp54bE9PXC0 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.71□□□□□ -0.37
Srp54bE9PXC0 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Srp54bE9PXC0 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Srp54bE9PXC0 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Srp54bE9PXC0 Gm43321-201ENSMUST00000198897 2409 ntBASIC12.71□□□□□ -0.38
Srp54bE9PXC0 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.71□□□□□ -0.38
Srp54bE9PXC0 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Srp54bE9PXC0 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.71□□□□□ -0.38
Srp54bE9PXC0 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Srp54bE9PXC0 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Srp54bE9PXC0 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Srp54bE9PXC0 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Srp54bE9PXC0 Gm44207-201ENSMUST00000204568 1424 ntBASIC12.71□□□□□ -0.38
Srp54bE9PXC0 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Srp54bE9PXC0 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Srp54bE9PXC0 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Srp54bE9PXC0 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Srp54bE9PXC0 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms