Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm28043E0CXC2 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Gm28043E0CXC2 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm28043E0CXC2 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12.96□□□□□ -0.33
Gm28043E0CXC2 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC12.96□□□□□ -0.33
Gm28043E0CXC2 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Gm28043E0CXC2 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.96□□□□□ -0.33
Gm28043E0CXC2 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Gm28043E0CXC2 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Gm28043E0CXC2 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Gm28043E0CXC2 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Gm28043E0CXC2 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Gm28043E0CXC2 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Gm28043E0CXC2 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.96□□□□□ -0.33
Gm28043E0CXC2 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.96□□□□□ -0.33
Gm28043E0CXC2 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Gm28043E0CXC2 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Gm28043E0CXC2 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Gm28043E0CXC2 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.96□□□□□ -0.33
Gm28043E0CXC2 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC12.96□□□□□ -0.33
Gm28043E0CXC2 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC12.96□□□□□ -0.33
Gm28043E0CXC2 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Gm28043E0CXC2 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.96□□□□□ -0.33
Gm28043E0CXC2 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Gm28043E0CXC2 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Gm28043E0CXC2 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Gm28043E0CXC2 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Gm28043E0CXC2 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Gm28043E0CXC2 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Gm28043E0CXC2 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Gm28043E0CXC2 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Gm28043E0CXC2 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.96□□□□□ -0.33
Gm28043E0CXC2 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Gm28043E0CXC2 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Gm28043E0CXC2 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.96□□□□□ -0.34
Gm28043E0CXC2 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Gm28043E0CXC2 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Gm28043E0CXC2 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Gm28043E0CXC2 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Gm28043E0CXC2 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Gm28043E0CXC2 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Gm28043E0CXC2 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.96□□□□□ -0.34
Gm28043E0CXC2 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Gm28043E0CXC2 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.96□□□□□ -0.34
Gm28043E0CXC2 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.96□□□□□ -0.34
Gm28043E0CXC2 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Gm28043E0CXC2 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm28043E0CXC2 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.95□□□□□ -0.34
Gm28043E0CXC2 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm28043E0CXC2 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm28043E0CXC2 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Gm28043E0CXC2 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Gm28043E0CXC2 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Gm28043E0CXC2 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm28043E0CXC2 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm28043E0CXC2 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Gm28043E0CXC2 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm28043E0CXC2 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Gm28043E0CXC2 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm28043E0CXC2 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm28043E0CXC2 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.95□□□□□ -0.34
Gm28043E0CXC2 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Gm28043E0CXC2 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm28043E0CXC2 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm28043E0CXC2 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Gm28043E0CXC2 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC12.95□□□□□ -0.34
Gm28043E0CXC2 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm28043E0CXC2 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm28043E0CXC2 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC12.95□□□□□ -0.34
Gm28043E0CXC2 Gm6473-201ENSMUST00000188572 1210 ntBASIC12.95□□□□□ -0.34
Gm28043E0CXC2 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC12.95□□□□□ -0.34
Gm28043E0CXC2 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm28043E0CXC2 Gm45668-201ENSMUST00000211271 493 ntBASIC12.95□□□□□ -0.34
Gm28043E0CXC2 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Gm28043E0CXC2 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm28043E0CXC2 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Gm28043E0CXC2 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC12.95□□□□□ -0.34
Gm28043E0CXC2 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm28043E0CXC2 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Gm28043E0CXC2 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Gm28043E0CXC2 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm28043E0CXC2 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm28043E0CXC2 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm28043E0CXC2 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Gm28043E0CXC2 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Gm28043E0CXC2 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm28043E0CXC2 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm28043E0CXC2 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Gm28043E0CXC2 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Gm28043E0CXC2 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm28043E0CXC2 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm28043E0CXC2 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Gm28043E0CXC2 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Gm28043E0CXC2 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Gm28043E0CXC2 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Gm28043E0CXC2 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
Gm28043E0CXC2 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm28043E0CXC2 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Gm28043E0CXC2 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm28043E0CXC2 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 73 ms