Protein–RNA interactions for Protein: D3Z3K2

Ccnb1ip1, E3 ubiquitin-protein ligase CCNB1IP1, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccnb1ip1D3Z3K2 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccnb1ip1D3Z3K2 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC11.62□□□□□ -0.55
Ccnb1ip1D3Z3K2 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccnb1ip1D3Z3K2 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccnb1ip1D3Z3K2 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.62□□□□□ -0.55
Ccnb1ip1D3Z3K2 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ccnb1ip1D3Z3K2 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Ccnb1ip1D3Z3K2 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccnb1ip1D3Z3K2 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccnb1ip1D3Z3K2 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ccnb1ip1D3Z3K2 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccnb1ip1D3Z3K2 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccnb1ip1D3Z3K2 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccnb1ip1D3Z3K2 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccnb1ip1D3Z3K2 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccnb1ip1D3Z3K2 Gm5638-201ENSMUST00000118618 1258 ntBASIC11.62□□□□□ -0.55
Ccnb1ip1D3Z3K2 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ccnb1ip1D3Z3K2 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC11.62□□□□□ -0.55
Ccnb1ip1D3Z3K2 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccnb1ip1D3Z3K2 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccnb1ip1D3Z3K2 Gm27628-201ENSMUST00000184911 107 ntBASIC11.62□□□□□ -0.55
Ccnb1ip1D3Z3K2 Gm38114-201ENSMUST00000191877 1232 ntBASIC11.62□□□□□ -0.55
Ccnb1ip1D3Z3K2 Gm6916-202ENSMUST00000205523 195 ntBASIC11.62□□□□□ -0.55
Ccnb1ip1D3Z3K2 Gm10060-201ENSMUST00000212002 111 ntBASIC11.62□□□□□ -0.55
Ccnb1ip1D3Z3K2 Gm8227-201ENSMUST00000223306 571 ntBASIC11.62□□□□□ -0.55
Ccnb1ip1D3Z3K2 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccnb1ip1D3Z3K2 Birc2-201ENSMUST00000054878 378 ntBASIC11.62□□□□□ -0.55
Ccnb1ip1D3Z3K2 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccnb1ip1D3Z3K2 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ccnb1ip1D3Z3K2 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccnb1ip1D3Z3K2 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccnb1ip1D3Z3K2 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccnb1ip1D3Z3K2 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ccnb1ip1D3Z3K2 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccnb1ip1D3Z3K2 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccnb1ip1D3Z3K2 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ccnb1ip1D3Z3K2 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC11.62□□□□□ -0.55
Ccnb1ip1D3Z3K2 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccnb1ip1D3Z3K2 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccnb1ip1D3Z3K2 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccnb1ip1D3Z3K2 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC11.62□□□□□ -0.55
Ccnb1ip1D3Z3K2 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccnb1ip1D3Z3K2 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccnb1ip1D3Z3K2 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccnb1ip1D3Z3K2 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC11.62□□□□□ -0.55
Ccnb1ip1D3Z3K2 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccnb1ip1D3Z3K2 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccnb1ip1D3Z3K2 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccnb1ip1D3Z3K2 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccnb1ip1D3Z3K2 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccnb1ip1D3Z3K2 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccnb1ip1D3Z3K2 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccnb1ip1D3Z3K2 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC11.61□□□□□ -0.55
Ccnb1ip1D3Z3K2 Gm38037-201ENSMUST00000192600 1624 ntBASIC11.61□□□□□ -0.55
Ccnb1ip1D3Z3K2 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ccnb1ip1D3Z3K2 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ccnb1ip1D3Z3K2 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccnb1ip1D3Z3K2 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ccnb1ip1D3Z3K2 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Ccnb1ip1D3Z3K2 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccnb1ip1D3Z3K2 Gm6912-201ENSMUST00000117218 544 ntBASIC11.61□□□□□ -0.55
Ccnb1ip1D3Z3K2 Gm14859-201ENSMUST00000117752 357 ntBASIC11.61□□□□□ -0.55
Ccnb1ip1D3Z3K2 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC11.61□□□□□ -0.55
Ccnb1ip1D3Z3K2 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC11.61□□□□□ -0.55
Ccnb1ip1D3Z3K2 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Ccnb1ip1D3Z3K2 Gm38225-201ENSMUST00000194001 393 ntBASIC11.61□□□□□ -0.55
Ccnb1ip1D3Z3K2 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Ccnb1ip1D3Z3K2 AC166341.4-201ENSMUST00000220625 123 ntBASIC11.61□□□□□ -0.55
Ccnb1ip1D3Z3K2 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccnb1ip1D3Z3K2 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC11.61□□□□□ -0.55
Ccnb1ip1D3Z3K2 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccnb1ip1D3Z3K2 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccnb1ip1D3Z3K2 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccnb1ip1D3Z3K2 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccnb1ip1D3Z3K2 Gm5859-201ENSMUST00000165401 2324 ntBASIC11.61□□□□□ -0.55
Ccnb1ip1D3Z3K2 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC11.61□□□□□ -0.55
Ccnb1ip1D3Z3K2 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccnb1ip1D3Z3K2 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ccnb1ip1D3Z3K2 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccnb1ip1D3Z3K2 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccnb1ip1D3Z3K2 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccnb1ip1D3Z3K2 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.61□□□□□ -0.55
Ccnb1ip1D3Z3K2 AC122291.1-201ENSMUST00000228937 5748 ntBASIC11.61□□□□□ -0.55
Ccnb1ip1D3Z3K2 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccnb1ip1D3Z3K2 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ccnb1ip1D3Z3K2 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ccnb1ip1D3Z3K2 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccnb1ip1D3Z3K2 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccnb1ip1D3Z3K2 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC11.61□□□□□ -0.55
Ccnb1ip1D3Z3K2 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccnb1ip1D3Z3K2 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Ccnb1ip1D3Z3K2 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccnb1ip1D3Z3K2 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccnb1ip1D3Z3K2 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccnb1ip1D3Z3K2 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccnb1ip1D3Z3K2 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccnb1ip1D3Z3K2 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccnb1ip1D3Z3K2 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccnb1ip1D3Z3K2 Gm44094-201ENSMUST00000204703 2030 ntBASIC11.6□□□□□ -0.55
Ccnb1ip1D3Z3K2 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms