Protein–RNA interactions for Protein: D3Z235

Gm3543, Predicted gene 3543, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3543D3Z235 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Gm3543D3Z235 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gm3543D3Z235 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gm3543D3Z235 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gm3543D3Z235 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Gm3543D3Z235 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Gm3543D3Z235 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Gm3543D3Z235 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gm3543D3Z235 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gm3543D3Z235 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gm3543D3Z235 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gm3543D3Z235 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Gm3543D3Z235 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gm3543D3Z235 Gm9200-201ENSMUST00000118513 1354 ntBASIC11.71□□□□□ -0.53
Gm3543D3Z235 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gm3543D3Z235 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gm3543D3Z235 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Gm3543D3Z235 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC11.71□□□□□ -0.53
Gm3543D3Z235 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Gm3543D3Z235 Gm2639-201ENSMUST00000156881 1297 ntBASIC11.71□□□□□ -0.53
Gm3543D3Z235 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gm3543D3Z235 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.53
Gm3543D3Z235 Gm9728-201ENSMUST00000200197 1055 ntBASIC11.71□□□□□ -0.53
Gm3543D3Z235 Gm29705-201ENSMUST00000212598 474 ntBASIC11.71□□□□□ -0.53
Gm3543D3Z235 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gm3543D3Z235 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gm3543D3Z235 Gm9899-201ENSMUST00000065519 555 ntBASIC11.71□□□□□ -0.53
Gm3543D3Z235 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Gm3543D3Z235 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gm3543D3Z235 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Gm3543D3Z235 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Gm3543D3Z235 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Gm3543D3Z235 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Gm3543D3Z235 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Gm3543D3Z235 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC11.71□□□□□ -0.54
Gm3543D3Z235 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Gm3543D3Z235 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Gm3543D3Z235 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Gm3543D3Z235 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Gm3543D3Z235 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Gm3543D3Z235 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Gm3543D3Z235 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Gm3543D3Z235 Ntrk2-204ENSMUST00000224259 3049 ntBASIC11.7□□□□□ -0.54
Gm3543D3Z235 Abhd6-203ENSMUST00000225234 1958 ntBASIC11.7□□□□□ -0.54
Gm3543D3Z235 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm3543D3Z235 Gm7553-201ENSMUST00000185805 1426 ntBASIC11.7□□□□□ -0.54
Gm3543D3Z235 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm3543D3Z235 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm3543D3Z235 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm3543D3Z235 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm3543D3Z235 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Gm3543D3Z235 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm3543D3Z235 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm3543D3Z235 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Gm3543D3Z235 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm3543D3Z235 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Gm3543D3Z235 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm3543D3Z235 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm3543D3Z235 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC11.7□□□□□ -0.54
Gm3543D3Z235 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC11.7□□□□□ -0.54
Gm3543D3Z235 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Gm3543D3Z235 Gm27331-201ENSMUST00000183705 60 ntBASIC11.7□□□□□ -0.54
Gm3543D3Z235 AC125350.2-201ENSMUST00000224737 727 ntBASIC11.7□□□□□ -0.54
Gm3543D3Z235 Gm2824-203ENSMUST00000226189 1228 ntBASIC11.7□□□□□ -0.54
Gm3543D3Z235 AC155237.1-201ENSMUST00000226196 1279 ntBASIC11.7□□□□□ -0.54
Gm3543D3Z235 AC122459.1-201ENSMUST00000228373 885 ntBASIC11.7□□□□□ -0.54
Gm3543D3Z235 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm3543D3Z235 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm3543D3Z235 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm3543D3Z235 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC11.7□□□□□ -0.54
Gm3543D3Z235 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm3543D3Z235 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Gm3543D3Z235 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Gm3543D3Z235 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Gm3543D3Z235 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm3543D3Z235 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm3543D3Z235 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm3543D3Z235 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm3543D3Z235 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm3543D3Z235 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Gm3543D3Z235 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm3543D3Z235 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm3543D3Z235 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC11.7□□□□□ -0.54
Gm3543D3Z235 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC11.7□□□□□ -0.54
Gm3543D3Z235 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm3543D3Z235 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Gm3543D3Z235 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
Gm3543D3Z235 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm3543D3Z235 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm3543D3Z235 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm3543D3Z235 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm3543D3Z235 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm3543D3Z235 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC11.69□□□□□ -0.54
Gm3543D3Z235 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm3543D3Z235 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm3543D3Z235 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Gm3543D3Z235 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Gm3543D3Z235 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm3543D3Z235 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Gm3543D3Z235 Gm12957-201ENSMUST00000117835 377 ntBASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms