Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Shank1D3YZU1 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Shank1D3YZU1 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC11.56□□□□□ -0.56
Shank1D3YZU1 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Shank1D3YZU1 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Shank1D3YZU1 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Shank1D3YZU1 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Shank1D3YZU1 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC11.56□□□□□ -0.56
Shank1D3YZU1 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Shank1D3YZU1 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Shank1D3YZU1 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
Shank1D3YZU1 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Shank1D3YZU1 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC11.55□□□□□ -0.56
Shank1D3YZU1 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Shank1D3YZU1 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC11.55□□□□□ -0.56
Shank1D3YZU1 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Shank1D3YZU1 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Shank1D3YZU1 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Shank1D3YZU1 Gm7848-201ENSMUST00000210739 718 ntBASIC11.55□□□□□ -0.56
Shank1D3YZU1 AC166051.1-201ENSMUST00000214313 210 ntBASIC11.55□□□□□ -0.56
Shank1D3YZU1 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC11.55□□□□□ -0.56
Shank1D3YZU1 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Shank1D3YZU1 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Shank1D3YZU1 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Shank1D3YZU1 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Shank1D3YZU1 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Shank1D3YZU1 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Shank1D3YZU1 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Shank1D3YZU1 Gm43908-201ENSMUST00000205074 1472 ntBASIC11.55□□□□□ -0.56
Shank1D3YZU1 Gm3287-205ENSMUST00000228893 1332 ntBASIC11.55□□□□□ -0.56
Shank1D3YZU1 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Shank1D3YZU1 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Shank1D3YZU1 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Shank1D3YZU1 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC11.55□□□□□ -0.56
Shank1D3YZU1 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC11.55□□□□□ -0.56
Shank1D3YZU1 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Shank1D3YZU1 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Shank1D3YZU1 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC11.55□□□□□ -0.56
Shank1D3YZU1 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Shank1D3YZU1 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Shank1D3YZU1 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Shank1D3YZU1 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Shank1D3YZU1 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Shank1D3YZU1 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC11.55□□□□□ -0.56
Shank1D3YZU1 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC11.55□□□□□ -0.56
Shank1D3YZU1 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Shank1D3YZU1 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Shank1D3YZU1 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Shank1D3YZU1 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Shank1D3YZU1 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Shank1D3YZU1 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Shank1D3YZU1 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Shank1D3YZU1 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Shank1D3YZU1 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Shank1D3YZU1 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Shank1D3YZU1 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC11.55□□□□□ -0.56
Shank1D3YZU1 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Shank1D3YZU1 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Shank1D3YZU1 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Shank1D3YZU1 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Shank1D3YZU1 Ksr1-207ENSMUST00000226282 5260 ntBASIC11.54□□□□□ -0.56
Shank1D3YZU1 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Shank1D3YZU1 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Shank1D3YZU1 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Shank1D3YZU1 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Shank1D3YZU1 Gm38157-201ENSMUST00000194178 1698 ntBASIC11.54□□□□□ -0.56
Shank1D3YZU1 Gm43273-201ENSMUST00000199649 2594 ntBASIC11.54□□□□□ -0.56
Shank1D3YZU1 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Shank1D3YZU1 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Shank1D3YZU1 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Shank1D3YZU1 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Shank1D3YZU1 Gm30238-201ENSMUST00000195528 2603 ntBASIC11.54□□□□□ -0.56
Shank1D3YZU1 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Shank1D3YZU1 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Shank1D3YZU1 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC11.54□□□□□ -0.56
Shank1D3YZU1 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC11.54□□□□□ -0.56
Shank1D3YZU1 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Shank1D3YZU1 Gm26361-201ENSMUST00000158868 186 ntBASIC11.54□□□□□ -0.56
Shank1D3YZU1 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Shank1D3YZU1 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Shank1D3YZU1 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.54□□□□□ -0.56
Shank1D3YZU1 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Shank1D3YZU1 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Shank1D3YZU1 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Shank1D3YZU1 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC11.54□□□□□ -0.56
Shank1D3YZU1 AC139350.1-201ENSMUST00000227064 1594 ntBASIC11.54□□□□□ -0.56
Shank1D3YZU1 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Shank1D3YZU1 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Shank1D3YZU1 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Shank1D3YZU1 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC11.54□□□□□ -0.56
Shank1D3YZU1 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC11.54□□□□□ -0.56
Shank1D3YZU1 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
Shank1D3YZU1 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Shank1D3YZU1 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Shank1D3YZU1 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Shank1D3YZU1 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Shank1D3YZU1 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC11.54□□□□□ -0.56
Shank1D3YZU1 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Shank1D3YZU1 Gm44136-201ENSMUST00000203819 1106 ntBASIC11.54□□□□□ -0.56
Shank1D3YZU1 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms