Protein–RNA interactions for Protein: D3YXE9

BC048679, cDNA sequence BC048679, mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC048679D3YXE9 AC238811.1-201ENSMUST00000225302 441 ntBASIC10.82□□□□□ -0.68
BC048679D3YXE9 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
BC048679D3YXE9 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
BC048679D3YXE9 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
BC048679D3YXE9 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC10.82□□□□□ -0.68
BC048679D3YXE9 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
BC048679D3YXE9 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
BC048679D3YXE9 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
BC048679D3YXE9 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
BC048679D3YXE9 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
BC048679D3YXE9 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
BC048679D3YXE9 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC10.82□□□□□ -0.68
BC048679D3YXE9 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
BC048679D3YXE9 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC10.82□□□□□ -0.68
BC048679D3YXE9 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
BC048679D3YXE9 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
BC048679D3YXE9 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
BC048679D3YXE9 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC10.82□□□□□ -0.68
BC048679D3YXE9 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
BC048679D3YXE9 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
BC048679D3YXE9 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC10.82□□□□□ -0.68
BC048679D3YXE9 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
BC048679D3YXE9 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
BC048679D3YXE9 Paupar-201ENSMUST00000194826 3482 ntBASIC10.82□□□□□ -0.68
BC048679D3YXE9 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
BC048679D3YXE9 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
BC048679D3YXE9 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
BC048679D3YXE9 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
BC048679D3YXE9 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
BC048679D3YXE9 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
BC048679D3YXE9 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
BC048679D3YXE9 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
BC048679D3YXE9 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC10.81□□□□□ -0.68
BC048679D3YXE9 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
BC048679D3YXE9 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
BC048679D3YXE9 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
BC048679D3YXE9 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
BC048679D3YXE9 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
BC048679D3YXE9 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
BC048679D3YXE9 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
BC048679D3YXE9 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
BC048679D3YXE9 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
BC048679D3YXE9 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
BC048679D3YXE9 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
BC048679D3YXE9 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
BC048679D3YXE9 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
BC048679D3YXE9 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
BC048679D3YXE9 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
BC048679D3YXE9 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
BC048679D3YXE9 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC10.81□□□□□ -0.68
BC048679D3YXE9 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
BC048679D3YXE9 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
BC048679D3YXE9 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC10.81□□□□□ -0.68
BC048679D3YXE9 Gm15376-201ENSMUST00000122258 783 ntBASIC10.81□□□□□ -0.68
BC048679D3YXE9 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC10.81□□□□□ -0.68
BC048679D3YXE9 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC10.81□□□□□ -0.68
BC048679D3YXE9 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
BC048679D3YXE9 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
BC048679D3YXE9 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
BC048679D3YXE9 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC10.81□□□□□ -0.68
BC048679D3YXE9 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC10.81□□□□□ -0.68
BC048679D3YXE9 AC159114.1-201ENSMUST00000220349 266 ntBASIC10.81□□□□□ -0.68
BC048679D3YXE9 AC139382.1-201ENSMUST00000221402 498 ntBASIC10.81□□□□□ -0.68
BC048679D3YXE9 AC093022.5-201ENSMUST00000226841 1079 ntBASIC10.81□□□□□ -0.68
BC048679D3YXE9 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
BC048679D3YXE9 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
BC048679D3YXE9 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
BC048679D3YXE9 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
BC048679D3YXE9 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
BC048679D3YXE9 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
BC048679D3YXE9 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
BC048679D3YXE9 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
BC048679D3YXE9 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
BC048679D3YXE9 Gm43045-201ENSMUST00000198725 2095 ntBASIC10.81□□□□□ -0.68
BC048679D3YXE9 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
BC048679D3YXE9 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
BC048679D3YXE9 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
BC048679D3YXE9 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
BC048679D3YXE9 Gm3052-202ENSMUST00000188254 2224 ntBASIC10.81□□□□□ -0.68
BC048679D3YXE9 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
BC048679D3YXE9 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
BC048679D3YXE9 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
BC048679D3YXE9 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
BC048679D3YXE9 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC10.81□□□□□ -0.68
BC048679D3YXE9 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
BC048679D3YXE9 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
BC048679D3YXE9 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
BC048679D3YXE9 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
BC048679D3YXE9 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
BC048679D3YXE9 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
BC048679D3YXE9 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
BC048679D3YXE9 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
BC048679D3YXE9 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC10.8□□□□□ -0.68
BC048679D3YXE9 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
BC048679D3YXE9 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
BC048679D3YXE9 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
BC048679D3YXE9 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
BC048679D3YXE9 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC10.8□□□□□ -0.68
BC048679D3YXE9 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
BC048679D3YXE9 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms