Protein–RNA interactions for Protein: B2RQC2

Usp42, Ubiquitin carboxyl-terminal hydrolase 42, mousemouse

Known RBP Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp42B2RQC2 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Usp42B2RQC2 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Usp42B2RQC2 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC15.07■□□□□ 0
Usp42B2RQC2 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Usp42B2RQC2 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
Usp42B2RQC2 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Usp42B2RQC2 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
Usp42B2RQC2 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC15.07■□□□□ 0
Usp42B2RQC2 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Usp42B2RQC2 Gm8228-201ENSMUST00000189949 2192 ntBASIC15.07■□□□□ 0
Usp42B2RQC2 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Usp42B2RQC2 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Usp42B2RQC2 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Usp42B2RQC2 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Usp42B2RQC2 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC15.06■□□□□ 0
Usp42B2RQC2 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Usp42B2RQC2 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Usp42B2RQC2 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Usp42B2RQC2 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Usp42B2RQC2 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC15.06■□□□□ 0
Usp42B2RQC2 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC15.06■□□□□ 0
Usp42B2RQC2 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Usp42B2RQC2 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC15.06■□□□□ 0
Usp42B2RQC2 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC15.06■□□□□ 0
Usp42B2RQC2 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Usp42B2RQC2 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Usp42B2RQC2 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC15.06■□□□□ 0
Usp42B2RQC2 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC15.06■□□□□ 0
Usp42B2RQC2 Gm22018-201ENSMUST00000104357 131 ntBASIC15.06■□□□□ 0
Usp42B2RQC2 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Usp42B2RQC2 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC15.06■□□□□ 0
Usp42B2RQC2 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC15.06■□□□□ 0
Usp42B2RQC2 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC15.06■□□□□ 0
Usp42B2RQC2 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC15.06■□□□□ 0
Usp42B2RQC2 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC15.06■□□□□ 0
Usp42B2RQC2 Gm3890-201ENSMUST00000182416 207 ntBASIC15.06■□□□□ 0
Usp42B2RQC2 AY702102-202ENSMUST00000194651 1173 ntBASIC15.06■□□□□ 0
Usp42B2RQC2 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC15.06■□□□□ 0
Usp42B2RQC2 AC166349.1-201ENSMUST00000220866 695 ntBASIC15.06■□□□□ 0
Usp42B2RQC2 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Usp42B2RQC2 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC15.06■□□□□ 0
Usp42B2RQC2 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC15.06■□□□□ 0
Usp42B2RQC2 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Usp42B2RQC2 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Usp42B2RQC2 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Usp42B2RQC2 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Usp42B2RQC2 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC15.06■□□□□ 0
Usp42B2RQC2 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC15.06■□□□□ 0
Usp42B2RQC2 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
Usp42B2RQC2 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Usp42B2RQC2 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Usp42B2RQC2 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Usp42B2RQC2 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC15.05■□□□□ 0
Usp42B2RQC2 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Usp42B2RQC2 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Usp42B2RQC2 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC15.05■□□□□ 0
Usp42B2RQC2 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Usp42B2RQC2 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Usp42B2RQC2 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Usp42B2RQC2 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ 0
Usp42B2RQC2 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Usp42B2RQC2 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC15.05■□□□□ -0
Usp42B2RQC2 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC15.05■□□□□ -0
Usp42B2RQC2 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Usp42B2RQC2 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Usp42B2RQC2 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC15.05■□□□□ -0
Usp42B2RQC2 Gm37424-201ENSMUST00000191727 561 ntBASIC15.05■□□□□ -0
Usp42B2RQC2 Gm9728-201ENSMUST00000200197 1055 ntBASIC15.05■□□□□ -0
Usp42B2RQC2 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC15.05■□□□□ -0
Usp42B2RQC2 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC15.05■□□□□ -0
Usp42B2RQC2 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC15.05■□□□□ -0
Usp42B2RQC2 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC15.05■□□□□ -0
Usp42B2RQC2 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC15.05■□□□□ -0
Usp42B2RQC2 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Usp42B2RQC2 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Usp42B2RQC2 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC15.05■□□□□ -0
Usp42B2RQC2 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ -0
Usp42B2RQC2 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Usp42B2RQC2 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Usp42B2RQC2 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
Usp42B2RQC2 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Usp42B2RQC2 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Usp42B2RQC2 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Usp42B2RQC2 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC15.04■□□□□ -0
Usp42B2RQC2 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Usp42B2RQC2 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC15.04■□□□□ -0
Usp42B2RQC2 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC15.04■□□□□ -0
Usp42B2RQC2 Gm43858-201ENSMUST00000199418 1778 ntBASIC15.04■□□□□ -0
Usp42B2RQC2 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC15.04■□□□□ -0
Usp42B2RQC2 Gm14127-201ENSMUST00000117906 678 ntBASIC15.04■□□□□ -0
Usp42B2RQC2 Gm9431-201ENSMUST00000119765 1051 ntBASIC15.04■□□□□ -0
Usp42B2RQC2 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC15.04■□□□□ -0
Usp42B2RQC2 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC15.04■□□□□ -0
Usp42B2RQC2 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC15.04■□□□□ -0
Usp42B2RQC2 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC15.04■□□□□ -0
Usp42B2RQC2 Gm18584-201ENSMUST00000203098 964 ntBASIC15.04■□□□□ -0
Usp42B2RQC2 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC15.04■□□□□ -0
Usp42B2RQC2 AC165260.3-202ENSMUST00000224550 1031 ntBASIC15.04■□□□□ -0
Usp42B2RQC2 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Usp42B2RQC2 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms