Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Gm5939-201ENSMUST00000119613 2874 ntBASIC13□□□□□ -0.33
Col4a6B1AVK5 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC13□□□□□ -0.33
Col4a6B1AVK5 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Col4a6B1AVK5 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Col4a6B1AVK5 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col4a6B1AVK5 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.99□□□□□ -0.33
Col4a6B1AVK5 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC12.99□□□□□ -0.33
Col4a6B1AVK5 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Col4a6B1AVK5 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
Col4a6B1AVK5 Gm6397-201ENSMUST00000161973 1069 ntBASIC12.99□□□□□ -0.33
Col4a6B1AVK5 Mir7677-201ENSMUST00000184226 67 ntBASIC12.99□□□□□ -0.33
Col4a6B1AVK5 CT571245.2-201ENSMUST00000218421 305 ntBASIC12.99□□□□□ -0.33
Col4a6B1AVK5 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.99□□□□□ -0.33
Col4a6B1AVK5 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.99□□□□□ -0.33
Col4a6B1AVK5 Gm7551-201ENSMUST00000089593 1074 ntBASIC12.99□□□□□ -0.33
Col4a6B1AVK5 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Col4a6B1AVK5 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC12.99□□□□□ -0.33
Col4a6B1AVK5 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col4a6B1AVK5 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col4a6B1AVK5 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col4a6B1AVK5 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Col4a6B1AVK5 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col4a6B1AVK5 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.99□□□□□ -0.33
Col4a6B1AVK5 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Col4a6B1AVK5 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col4a6B1AVK5 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Col4a6B1AVK5 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Col4a6B1AVK5 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col4a6B1AVK5 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col4a6B1AVK5 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC12.99□□□□□ -0.33
Col4a6B1AVK5 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col4a6B1AVK5 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Col4a6B1AVK5 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.99□□□□□ -0.33
Col4a6B1AVK5 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
Col4a6B1AVK5 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Col4a6B1AVK5 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC12.99□□□□□ -0.33
Col4a6B1AVK5 Gm22138-201ENSMUST00000158748 128 ntBASIC12.99□□□□□ -0.33
Col4a6B1AVK5 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col4a6B1AVK5 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Col4a6B1AVK5 Gm4607-201ENSMUST00000206649 577 ntBASIC12.99□□□□□ -0.33
Col4a6B1AVK5 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC12.99□□□□□ -0.33
Col4a6B1AVK5 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC12.99□□□□□ -0.33
Col4a6B1AVK5 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col4a6B1AVK5 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Col4a6B1AVK5 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col4a6B1AVK5 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col4a6B1AVK5 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col4a6B1AVK5 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Col4a6B1AVK5 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col4a6B1AVK5 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col4a6B1AVK5 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col4a6B1AVK5 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Col4a6B1AVK5 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col4a6B1AVK5 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col4a6B1AVK5 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col4a6B1AVK5 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col4a6B1AVK5 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col4a6B1AVK5 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
Col4a6B1AVK5 Gm13888-201ENSMUST00000119148 422 ntBASIC12.98□□□□□ -0.33
Col4a6B1AVK5 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Col4a6B1AVK5 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Col4a6B1AVK5 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Col4a6B1AVK5 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.98□□□□□ -0.33
Col4a6B1AVK5 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Col4a6B1AVK5 Gm8343-201ENSMUST00000182705 994 ntBASIC12.98□□□□□ -0.33
Col4a6B1AVK5 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC12.98□□□□□ -0.33
Col4a6B1AVK5 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Col4a6B1AVK5 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col4a6B1AVK5 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Col4a6B1AVK5 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC12.98□□□□□ -0.33
Col4a6B1AVK5 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.98□□□□□ -0.33
Col4a6B1AVK5 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col4a6B1AVK5 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Col4a6B1AVK5 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col4a6B1AVK5 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col4a6B1AVK5 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col4a6B1AVK5 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Col4a6B1AVK5 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Col4a6B1AVK5 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col4a6B1AVK5 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Col4a6B1AVK5 Gm19863-201ENSMUST00000192480 2218 ntBASIC12.97□□□□□ -0.33
Col4a6B1AVK5 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Col4a6B1AVK5 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Col4a6B1AVK5 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col4a6B1AVK5 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col4a6B1AVK5 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.97□□□□□ -0.33
Col4a6B1AVK5 Gm26286-201ENSMUST00000104166 134 ntBASIC12.97□□□□□ -0.33
Col4a6B1AVK5 Gm16166-201ENSMUST00000118291 787 ntBASIC12.97□□□□□ -0.33
Col4a6B1AVK5 Gm7666-201ENSMUST00000146631 819 ntBASIC12.97□□□□□ -0.33
Col4a6B1AVK5 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Col4a6B1AVK5 Ighv4-2-201ENSMUST00000192975 362 ntBASIC12.97□□□□□ -0.33
Col4a6B1AVK5 Gm43184-201ENSMUST00000197247 542 ntBASIC12.97□□□□□ -0.33
Col4a6B1AVK5 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC12.97□□□□□ -0.33
Col4a6B1AVK5 CT485607.1-201ENSMUST00000216100 85 ntBASIC12.97□□□□□ -0.33
Col4a6B1AVK5 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Col4a6B1AVK5 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Col4a6B1AVK5 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Col4a6B1AVK5 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.97□□□□□ -0.33
Col4a6B1AVK5 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.97□□□□□ -0.33
Col4a6B1AVK5 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms