Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC9.39□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC9.39□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC9.39□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Gm42929-201ENSMUST00000198374 1286 ntBASIC9.39□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Gm44064-201ENSMUST00000204964 1087 ntBASIC9.39□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC9.39□□□□□ -0.91
Trav9n-2A0A0G2JDP3 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC9.39□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC9.39□□□□□ -0.91
Trav9n-2A0A0G2JDP3 AC154239.3-201ENSMUST00000226933 674 ntBASIC9.39□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Gm45643-201ENSMUST00000211364 1484 ntBASIC9.39□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC9.39□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC9.38□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC9.38□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav9n-2A0A0G2JDP3 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Trav9n-2A0A0G2JDP3 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC9.38□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC9.38□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav9n-2A0A0G2JDP3 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Gm44069-201ENSMUST00000204898 506 ntBASIC9.38□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Gm8463-201ENSMUST00000208573 613 ntBASIC9.38□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC9.38□□□□□ -0.91
Trav9n-2A0A0G2JDP3 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav9n-2A0A0G2JDP3 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC9.38□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC9.38□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Gm13127-201ENSMUST00000118978 1389 ntBASIC9.37□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Gm45003-201ENSMUST00000205875 2158 ntBASIC9.37□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC9.37□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms