Protein–RNA interactions for Protein: Q9Z2C6

Upk1b, Uroplakin-1b, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1bQ9Z2C6 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC11.98□□□□□ -0.49
Upk1bQ9Z2C6 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Upk1bQ9Z2C6 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
Upk1bQ9Z2C6 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
Upk1bQ9Z2C6 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Upk1bQ9Z2C6 Gm27618-201ENSMUST00000183671 60 ntBASIC11.98□□□□□ -0.49
Upk1bQ9Z2C6 Gm38294-201ENSMUST00000192831 381 ntBASIC11.98□□□□□ -0.49
Upk1bQ9Z2C6 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Upk1bQ9Z2C6 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC11.98□□□□□ -0.49
Upk1bQ9Z2C6 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC11.98□□□□□ -0.49
Upk1bQ9Z2C6 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Upk1bQ9Z2C6 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Upk1bQ9Z2C6 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Upk1bQ9Z2C6 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Upk1bQ9Z2C6 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Upk1bQ9Z2C6 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Upk1bQ9Z2C6 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.98□□□□□ -0.49
Upk1bQ9Z2C6 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Upk1bQ9Z2C6 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Upk1bQ9Z2C6 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Upk1bQ9Z2C6 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Upk1bQ9Z2C6 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC11.98□□□□□ -0.49
Upk1bQ9Z2C6 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Upk1bQ9Z2C6 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Upk1bQ9Z2C6 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Upk1bQ9Z2C6 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Upk1bQ9Z2C6 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Upk1bQ9Z2C6 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Upk1bQ9Z2C6 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC11.97□□□□□ -0.49
Upk1bQ9Z2C6 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Upk1bQ9Z2C6 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Upk1bQ9Z2C6 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Upk1bQ9Z2C6 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Upk1bQ9Z2C6 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Upk1bQ9Z2C6 AC157950.1-201ENSMUST00000217561 2168 ntBASIC11.97□□□□□ -0.49
Upk1bQ9Z2C6 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC11.97□□□□□ -0.49
Upk1bQ9Z2C6 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC11.97□□□□□ -0.49
Upk1bQ9Z2C6 Gm43094-201ENSMUST00000196549 921 ntBASIC11.97□□□□□ -0.49
Upk1bQ9Z2C6 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Upk1bQ9Z2C6 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC11.97□□□□□ -0.49
Upk1bQ9Z2C6 Chchd1-203ENSMUST00000224633 557 ntBASIC11.97□□□□□ -0.49
Upk1bQ9Z2C6 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Upk1bQ9Z2C6 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Upk1bQ9Z2C6 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Upk1bQ9Z2C6 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Upk1bQ9Z2C6 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Upk1bQ9Z2C6 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC11.97□□□□□ -0.49
Upk1bQ9Z2C6 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.97□□□□□ -0.49
Upk1bQ9Z2C6 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Upk1bQ9Z2C6 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Upk1bQ9Z2C6 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Upk1bQ9Z2C6 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Upk1bQ9Z2C6 Gm8617-201ENSMUST00000118796 2222 ntBASIC11.96□□□□□ -0.49
Upk1bQ9Z2C6 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Upk1bQ9Z2C6 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Upk1bQ9Z2C6 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC11.96□□□□□ -0.49
Upk1bQ9Z2C6 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Upk1bQ9Z2C6 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Upk1bQ9Z2C6 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC11.96□□□□□ -0.49
Upk1bQ9Z2C6 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Upk1bQ9Z2C6 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.96□□□□□ -0.49
Upk1bQ9Z2C6 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Upk1bQ9Z2C6 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Upk1bQ9Z2C6 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Upk1bQ9Z2C6 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Upk1bQ9Z2C6 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Upk1bQ9Z2C6 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
Upk1bQ9Z2C6 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
Upk1bQ9Z2C6 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Upk1bQ9Z2C6 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Upk1bQ9Z2C6 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Upk1bQ9Z2C6 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Upk1bQ9Z2C6 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Upk1bQ9Z2C6 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC11.96□□□□□ -0.49
Upk1bQ9Z2C6 Gm5638-201ENSMUST00000118618 1258 ntBASIC11.96□□□□□ -0.49
Upk1bQ9Z2C6 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC11.96□□□□□ -0.49
Upk1bQ9Z2C6 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Upk1bQ9Z2C6 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC11.96□□□□□ -0.49
Upk1bQ9Z2C6 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC11.96□□□□□ -0.49
Upk1bQ9Z2C6 Gm26464-201ENSMUST00000157094 305 ntBASIC11.96□□□□□ -0.49
Upk1bQ9Z2C6 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Upk1bQ9Z2C6 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Upk1bQ9Z2C6 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Upk1bQ9Z2C6 Gm27430-201ENSMUST00000184585 107 ntBASIC11.96□□□□□ -0.49
Upk1bQ9Z2C6 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.96□□□□□ -0.49
Upk1bQ9Z2C6 Gm44333-201ENSMUST00000197168 107 ntBASIC11.96□□□□□ -0.49
Upk1bQ9Z2C6 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC11.96□□□□□ -0.49
Upk1bQ9Z2C6 CT943659.1-201ENSMUST00000215459 326 ntBASIC11.96□□□□□ -0.49
Upk1bQ9Z2C6 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC11.96□□□□□ -0.49
Upk1bQ9Z2C6 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Upk1bQ9Z2C6 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Upk1bQ9Z2C6 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Upk1bQ9Z2C6 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Upk1bQ9Z2C6 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Upk1bQ9Z2C6 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Upk1bQ9Z2C6 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Upk1bQ9Z2C6 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC11.96□□□□□ -0.5
Upk1bQ9Z2C6 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Upk1bQ9Z2C6 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Upk1bQ9Z2C6 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms