Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cldn9Q9Z0S7 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cldn9Q9Z0S7 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cldn9Q9Z0S7 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cldn9Q9Z0S7 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cldn9Q9Z0S7 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.43□□□□□ -0.42
Cldn9Q9Z0S7 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cldn9Q9Z0S7 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cldn9Q9Z0S7 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cldn9Q9Z0S7 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Cldn9Q9Z0S7 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.43□□□□□ -0.42
Cldn9Q9Z0S7 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cldn9Q9Z0S7 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cldn9Q9Z0S7 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Cldn9Q9Z0S7 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cldn9Q9Z0S7 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cldn9Q9Z0S7 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC12.43□□□□□ -0.42
Cldn9Q9Z0S7 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cldn9Q9Z0S7 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Cldn9Q9Z0S7 Proscos-202ENSMUST00000178990 666 ntBASIC12.43□□□□□ -0.42
Cldn9Q9Z0S7 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.43□□□□□ -0.42
Cldn9Q9Z0S7 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.43□□□□□ -0.42
Cldn9Q9Z0S7 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Cldn9Q9Z0S7 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cldn9Q9Z0S7 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cldn9Q9Z0S7 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cldn9Q9Z0S7 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Cldn9Q9Z0S7 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.43□□□□□ -0.42
Cldn9Q9Z0S7 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cldn9Q9Z0S7 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Cldn9Q9Z0S7 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.43□□□□□ -0.42
Cldn9Q9Z0S7 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.43□□□□□ -0.42
Cldn9Q9Z0S7 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
Cldn9Q9Z0S7 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cldn9Q9Z0S7 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Cldn9Q9Z0S7 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cldn9Q9Z0S7 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cldn9Q9Z0S7 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.43□□□□□ -0.42
Cldn9Q9Z0S7 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cldn9Q9Z0S7 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cldn9Q9Z0S7 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Cldn9Q9Z0S7 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cldn9Q9Z0S7 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cldn9Q9Z0S7 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cldn9Q9Z0S7 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cldn9Q9Z0S7 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Cldn9Q9Z0S7 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cldn9Q9Z0S7 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cldn9Q9Z0S7 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.42□□□□□ -0.42
Cldn9Q9Z0S7 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC12.42□□□□□ -0.42
Cldn9Q9Z0S7 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.42□□□□□ -0.42
Cldn9Q9Z0S7 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cldn9Q9Z0S7 Gm6244-201ENSMUST00000178732 841 ntBASIC12.42□□□□□ -0.42
Cldn9Q9Z0S7 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC12.42□□□□□ -0.42
Cldn9Q9Z0S7 Gm17794-201ENSMUST00000220252 955 ntBASIC12.42□□□□□ -0.42
Cldn9Q9Z0S7 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.42□□□□□ -0.42
Cldn9Q9Z0S7 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cldn9Q9Z0S7 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Cldn9Q9Z0S7 Gm5356-201ENSMUST00000093326 615 ntBASIC12.42□□□□□ -0.42
Cldn9Q9Z0S7 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cldn9Q9Z0S7 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.42□□□□□ -0.42
Cldn9Q9Z0S7 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
Cldn9Q9Z0S7 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cldn9Q9Z0S7 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.42□□□□□ -0.42
Cldn9Q9Z0S7 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cldn9Q9Z0S7 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn9Q9Z0S7 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn9Q9Z0S7 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn9Q9Z0S7 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn9Q9Z0S7 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.41□□□□□ -0.42
Cldn9Q9Z0S7 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn9Q9Z0S7 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Cldn9Q9Z0S7 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn9Q9Z0S7 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn9Q9Z0S7 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn9Q9Z0S7 Gm8805-201ENSMUST00000117848 313 ntBASIC12.41□□□□□ -0.42
Cldn9Q9Z0S7 Gm12960-201ENSMUST00000120017 1066 ntBASIC12.41□□□□□ -0.42
Cldn9Q9Z0S7 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.41□□□□□ -0.42
Cldn9Q9Z0S7 Mir1894-201ENSMUST00000122802 81 ntBASIC12.41□□□□□ -0.42
Cldn9Q9Z0S7 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn9Q9Z0S7 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn9Q9Z0S7 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.41□□□□□ -0.42
Cldn9Q9Z0S7 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.41□□□□□ -0.42
Cldn9Q9Z0S7 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Cldn9Q9Z0S7 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.41□□□□□ -0.42
Cldn9Q9Z0S7 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn9Q9Z0S7 Gm37922-201ENSMUST00000195596 455 ntBASIC12.41□□□□□ -0.42
Cldn9Q9Z0S7 AC110817.1-201ENSMUST00000225706 605 ntBASIC12.41□□□□□ -0.42
Cldn9Q9Z0S7 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn9Q9Z0S7 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn9Q9Z0S7 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn9Q9Z0S7 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn9Q9Z0S7 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn9Q9Z0S7 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Cldn9Q9Z0S7 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn9Q9Z0S7 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn9Q9Z0S7 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn9Q9Z0S7 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn9Q9Z0S7 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn9Q9Z0S7 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms