Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Gm42929-201ENSMUST00000198374 1286 ntBASIC14.24□□□□□ -0.13
Prpf40aQ9R1C7 Gm44069-201ENSMUST00000204898 506 ntBASIC14.24□□□□□ -0.13
Prpf40aQ9R1C7 AC135669.1-202ENSMUST00000216742 540 ntBASIC14.24□□□□□ -0.13
Prpf40aQ9R1C7 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf40aQ9R1C7 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf40aQ9R1C7 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf40aQ9R1C7 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
Prpf40aQ9R1C7 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf40aQ9R1C7 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf40aQ9R1C7 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf40aQ9R1C7 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf40aQ9R1C7 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf40aQ9R1C7 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf40aQ9R1C7 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Prpf40aQ9R1C7 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prpf40aQ9R1C7 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prpf40aQ9R1C7 Rubie-203ENSMUST00000227803 2430 ntBASIC14.23□□□□□ -0.13
Prpf40aQ9R1C7 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prpf40aQ9R1C7 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prpf40aQ9R1C7 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prpf40aQ9R1C7 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Prpf40aQ9R1C7 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Prpf40aQ9R1C7 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Prpf40aQ9R1C7 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prpf40aQ9R1C7 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Prpf40aQ9R1C7 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC14.23□□□□□ -0.13
Prpf40aQ9R1C7 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC14.23□□□□□ -0.13
Prpf40aQ9R1C7 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC14.23□□□□□ -0.13
Prpf40aQ9R1C7 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Prpf40aQ9R1C7 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Prpf40aQ9R1C7 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prpf40aQ9R1C7 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC14.23□□□□□ -0.13
Prpf40aQ9R1C7 Gm43275-201ENSMUST00000202053 1020 ntBASIC14.23□□□□□ -0.13
Prpf40aQ9R1C7 Gm44064-201ENSMUST00000204964 1087 ntBASIC14.23□□□□□ -0.13
Prpf40aQ9R1C7 Gm7067-201ENSMUST00000207698 1249 ntBASIC14.23□□□□□ -0.13
Prpf40aQ9R1C7 AC122305.4-201ENSMUST00000216159 1206 ntBASIC14.23□□□□□ -0.13
Prpf40aQ9R1C7 Gm8598-201ENSMUST00000221184 836 ntBASIC14.23□□□□□ -0.13
Prpf40aQ9R1C7 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prpf40aQ9R1C7 Gm10012-201ENSMUST00000078252 192 ntBASIC14.23□□□□□ -0.13
Prpf40aQ9R1C7 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Prpf40aQ9R1C7 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prpf40aQ9R1C7 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
Prpf40aQ9R1C7 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prpf40aQ9R1C7 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prpf40aQ9R1C7 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prpf40aQ9R1C7 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Prpf40aQ9R1C7 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf40aQ9R1C7 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf40aQ9R1C7 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf40aQ9R1C7 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf40aQ9R1C7 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC14.22□□□□□ -0.13
Prpf40aQ9R1C7 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf40aQ9R1C7 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC14.22□□□□□ -0.13
Prpf40aQ9R1C7 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC14.22□□□□□ -0.13
Prpf40aQ9R1C7 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
Prpf40aQ9R1C7 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf40aQ9R1C7 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC14.22□□□□□ -0.13
Prpf40aQ9R1C7 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf40aQ9R1C7 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Prpf40aQ9R1C7 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf40aQ9R1C7 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf40aQ9R1C7 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC14.22□□□□□ -0.13
Prpf40aQ9R1C7 Proscos-202ENSMUST00000178990 666 ntBASIC14.22□□□□□ -0.13
Prpf40aQ9R1C7 Gm24196-201ENSMUST00000179161 110 ntBASIC14.22□□□□□ -0.13
Prpf40aQ9R1C7 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf40aQ9R1C7 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf40aQ9R1C7 2010110E17Rik-201ENSMUST00000184161 879 ntBASIC14.22□□□□□ -0.13
Prpf40aQ9R1C7 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf40aQ9R1C7 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf40aQ9R1C7 Gm37748-201ENSMUST00000194379 1140 ntBASIC14.22□□□□□ -0.13
Prpf40aQ9R1C7 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC14.22□□□□□ -0.13
Prpf40aQ9R1C7 Gm19931-201ENSMUST00000198920 368 ntBASIC14.22□□□□□ -0.13
Prpf40aQ9R1C7 Gm44799-201ENSMUST00000207639 1202 ntBASIC14.22□□□□□ -0.13
Prpf40aQ9R1C7 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf40aQ9R1C7 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC14.22□□□□□ -0.13
Prpf40aQ9R1C7 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf40aQ9R1C7 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Prpf40aQ9R1C7 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf40aQ9R1C7 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf40aQ9R1C7 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf40aQ9R1C7 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Prpf40aQ9R1C7 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf40aQ9R1C7 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Prpf40aQ9R1C7 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf40aQ9R1C7 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf40aQ9R1C7 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf40aQ9R1C7 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Prpf40aQ9R1C7 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Prpf40aQ9R1C7 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf40aQ9R1C7 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf40aQ9R1C7 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf40aQ9R1C7 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Prpf40aQ9R1C7 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prpf40aQ9R1C7 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prpf40aQ9R1C7 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC14.21□□□□□ -0.13
Prpf40aQ9R1C7 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
Prpf40aQ9R1C7 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Prpf40aQ9R1C7 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC14.21□□□□□ -0.13
Prpf40aQ9R1C7 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC14.21□□□□□ -0.13
Prpf40aQ9R1C7 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms