Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col4a4Q9QZR9 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col4a4Q9QZR9 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col4a4Q9QZR9 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col4a4Q9QZR9 Gm11949-201ENSMUST00000117640 372 ntBASIC12.6□□□□□ -0.39
Col4a4Q9QZR9 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Col4a4Q9QZR9 Gm12856-201ENSMUST00000119471 1293 ntBASIC12.6□□□□□ -0.39
Col4a4Q9QZR9 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC12.6□□□□□ -0.39
Col4a4Q9QZR9 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC12.6□□□□□ -0.39
Col4a4Q9QZR9 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC12.6□□□□□ -0.39
Col4a4Q9QZR9 Gm9645-201ENSMUST00000197131 792 ntBASIC12.6□□□□□ -0.39
Col4a4Q9QZR9 Gm18463-201ENSMUST00000207258 474 ntBASIC12.6□□□□□ -0.39
Col4a4Q9QZR9 Gm18460-201ENSMUST00000208088 464 ntBASIC12.6□□□□□ -0.39
Col4a4Q9QZR9 AC115122.1-201ENSMUST00000224850 1040 ntBASIC12.6□□□□□ -0.39
Col4a4Q9QZR9 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col4a4Q9QZR9 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Col4a4Q9QZR9 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col4a4Q9QZR9 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Col4a4Q9QZR9 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Col4a4Q9QZR9 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col4a4Q9QZR9 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col4a4Q9QZR9 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Col4a4Q9QZR9 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Col4a4Q9QZR9 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
Col4a4Q9QZR9 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC12.59□□□□□ -0.39
Col4a4Q9QZR9 Gm26013-201ENSMUST00000104404 119 ntBASIC12.59□□□□□ -0.39
Col4a4Q9QZR9 Gm12218-201ENSMUST00000117666 399 ntBASIC12.59□□□□□ -0.39
Col4a4Q9QZR9 Gm11511-201ENSMUST00000118146 540 ntBASIC12.59□□□□□ -0.39
Col4a4Q9QZR9 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC12.59□□□□□ -0.39
Col4a4Q9QZR9 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.59□□□□□ -0.39
Col4a4Q9QZR9 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Col4a4Q9QZR9 Gm9022-201ENSMUST00000182482 992 ntBASIC12.59□□□□□ -0.39
Col4a4Q9QZR9 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC12.59□□□□□ -0.39
Col4a4Q9QZR9 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Col4a4Q9QZR9 Gm45856-201ENSMUST00000212752 416 ntBASIC12.59□□□□□ -0.39
Col4a4Q9QZR9 Gm40879-201ENSMUST00000220759 612 ntBASIC12.59□□□□□ -0.39
Col4a4Q9QZR9 AC136376.2-201ENSMUST00000228819 490 ntBASIC12.59□□□□□ -0.39
Col4a4Q9QZR9 Gm25201-201ENSMUST00000083093 170 ntBASIC12.59□□□□□ -0.39
Col4a4Q9QZR9 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col4a4Q9QZR9 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Col4a4Q9QZR9 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Col4a4Q9QZR9 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col4a4Q9QZR9 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col4a4Q9QZR9 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col4a4Q9QZR9 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Col4a4Q9QZR9 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col4a4Q9QZR9 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Col4a4Q9QZR9 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col4a4Q9QZR9 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col4a4Q9QZR9 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Col4a4Q9QZR9 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col4a4Q9QZR9 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col4a4Q9QZR9 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Col4a4Q9QZR9 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Col4a4Q9QZR9 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Col4a4Q9QZR9 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Col4a4Q9QZR9 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col4a4Q9QZR9 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col4a4Q9QZR9 Gm22920-201ENSMUST00000102175 109 ntBASIC12.58□□□□□ -0.4
Col4a4Q9QZR9 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Col4a4Q9QZR9 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
Col4a4Q9QZR9 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Col4a4Q9QZR9 Gm18201-201ENSMUST00000174735 875 ntBASIC12.58□□□□□ -0.4
Col4a4Q9QZR9 Gm18367-201ENSMUST00000176139 600 ntBASIC12.58□□□□□ -0.4
Col4a4Q9QZR9 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Col4a4Q9QZR9 Gm8956-201ENSMUST00000203939 825 ntBASIC12.58□□□□□ -0.4
Col4a4Q9QZR9 Gm44421-201ENSMUST00000205064 1221 ntBASIC12.58□□□□□ -0.4
Col4a4Q9QZR9 Gm3318-201ENSMUST00000217604 1183 ntBASIC12.58□□□□□ -0.4
Col4a4Q9QZR9 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC12.58□□□□□ -0.4
Col4a4Q9QZR9 Ap3s1-202ENSMUST00000224622 978 ntBASIC12.58□□□□□ -0.4
Col4a4Q9QZR9 CT025602.2-201ENSMUST00000226553 772 ntBASIC12.58□□□□□ -0.4
Col4a4Q9QZR9 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col4a4Q9QZR9 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC12.58□□□□□ -0.4
Col4a4Q9QZR9 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col4a4Q9QZR9 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col4a4Q9QZR9 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col4a4Q9QZR9 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col4a4Q9QZR9 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col4a4Q9QZR9 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.58□□□□□ -0.4
Col4a4Q9QZR9 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col4a4Q9QZR9 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Col4a4Q9QZR9 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col4a4Q9QZR9 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col4a4Q9QZR9 Gm37859-201ENSMUST00000195529 2173 ntBASIC12.58□□□□□ -0.4
Col4a4Q9QZR9 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Col4a4Q9QZR9 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col4a4Q9QZR9 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
Col4a4Q9QZR9 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Col4a4Q9QZR9 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Col4a4Q9QZR9 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Col4a4Q9QZR9 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Col4a4Q9QZR9 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Col4a4Q9QZR9 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col4a4Q9QZR9 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col4a4Q9QZR9 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Col4a4Q9QZR9 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col4a4Q9QZR9 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Col4a4Q9QZR9 Gm24231-201ENSMUST00000104315 133 ntBASIC12.57□□□□□ -0.4
Col4a4Q9QZR9 Gm12419-201ENSMUST00000116649 636 ntBASIC12.57□□□□□ -0.4
Col4a4Q9QZR9 Gm11663-201ENSMUST00000117888 290 ntBASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms