Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trem1Q9JKE2 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trem1Q9JKE2 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC11.54□□□□□ -0.56
Trem1Q9JKE2 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trem1Q9JKE2 Gm6211-201ENSMUST00000147973 4275 ntBASIC11.54□□□□□ -0.56
Trem1Q9JKE2 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trem1Q9JKE2 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC11.54□□□□□ -0.56
Trem1Q9JKE2 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trem1Q9JKE2 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC11.54□□□□□ -0.56
Trem1Q9JKE2 Gm6973-201ENSMUST00000117080 721 ntBASIC11.54□□□□□ -0.56
Trem1Q9JKE2 Gm15957-201ENSMUST00000118893 974 ntBASIC11.54□□□□□ -0.56
Trem1Q9JKE2 Gm10459-201ENSMUST00000202708 1155 ntBASIC11.54□□□□□ -0.56
Trem1Q9JKE2 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Trem1Q9JKE2 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trem1Q9JKE2 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trem1Q9JKE2 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trem1Q9JKE2 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC11.54□□□□□ -0.56
Trem1Q9JKE2 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Trem1Q9JKE2 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trem1Q9JKE2 Gm37333-201ENSMUST00000192904 2251 ntBASIC11.54□□□□□ -0.56
Trem1Q9JKE2 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC11.54□□□□□ -0.56
Trem1Q9JKE2 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trem1Q9JKE2 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trem1Q9JKE2 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trem1Q9JKE2 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trem1Q9JKE2 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trem1Q9JKE2 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trem1Q9JKE2 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trem1Q9JKE2 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC11.54□□□□□ -0.56
Trem1Q9JKE2 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trem1Q9JKE2 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trem1Q9JKE2 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trem1Q9JKE2 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trem1Q9JKE2 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trem1Q9JKE2 Ap4m1-201ENSMUST00000019662 3479 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trem1Q9JKE2 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC11.54□□□□□ -0.56
Trem1Q9JKE2 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC11.54□□□□□ -0.56
Trem1Q9JKE2 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trem1Q9JKE2 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Trem1Q9JKE2 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trem1Q9JKE2 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trem1Q9JKE2 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trem1Q9JKE2 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trem1Q9JKE2 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Trem1Q9JKE2 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.53□□□□□ -0.56
Trem1Q9JKE2 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trem1Q9JKE2 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trem1Q9JKE2 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trem1Q9JKE2 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC11.53□□□□□ -0.56
Trem1Q9JKE2 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trem1Q9JKE2 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trem1Q9JKE2 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC11.53□□□□□ -0.56
Trem1Q9JKE2 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
Trem1Q9JKE2 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trem1Q9JKE2 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC11.53□□□□□ -0.56
Trem1Q9JKE2 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC11.53□□□□□ -0.56
Trem1Q9JKE2 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trem1Q9JKE2 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC11.53□□□□□ -0.56
Trem1Q9JKE2 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC11.53□□□□□ -0.56
Trem1Q9JKE2 Gm28659-201ENSMUST00000188013 759 ntBASIC11.53□□□□□ -0.56
Trem1Q9JKE2 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trem1Q9JKE2 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC11.53□□□□□ -0.56
Trem1Q9JKE2 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trem1Q9JKE2 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trem1Q9JKE2 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trem1Q9JKE2 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trem1Q9JKE2 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trem1Q9JKE2 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trem1Q9JKE2 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trem1Q9JKE2 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trem1Q9JKE2 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trem1Q9JKE2 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Trem1Q9JKE2 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Trem1Q9JKE2 Pla2g4a-201ENSMUST00000070200 2856 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trem1Q9JKE2 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trem1Q9JKE2 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trem1Q9JKE2 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Trem1Q9JKE2 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Trem1Q9JKE2 Gm9466-201ENSMUST00000218144 2246 ntBASIC11.52□□□□□ -0.56
Trem1Q9JKE2 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trem1Q9JKE2 Zcchc7-203ENSMUST00000107824 2503 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Trem1Q9JKE2 Mapre2-203ENSMUST00000118826 3052 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Trem1Q9JKE2 Tmem130-201ENSMUST00000061446 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trem1Q9JKE2 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trem1Q9JKE2 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trem1Q9JKE2 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trem1Q9JKE2 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Trem1Q9JKE2 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trem1Q9JKE2 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trem1Q9JKE2 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trem1Q9JKE2 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trem1Q9JKE2 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trem1Q9JKE2 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC11.52□□□□□ -0.57
Trem1Q9JKE2 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC11.52□□□□□ -0.57
Trem1Q9JKE2 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trem1Q9JKE2 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trem1Q9JKE2 Gm44492-201ENSMUST00000197012 141 ntBASIC11.52□□□□□ -0.57
Trem1Q9JKE2 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC11.52□□□□□ -0.57
Trem1Q9JKE2 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trem1Q9JKE2 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms