Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chmp2aQ9DB34 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chmp2aQ9DB34 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chmp2aQ9DB34 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chmp2aQ9DB34 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Chmp2aQ9DB34 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Chmp2aQ9DB34 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Chmp2aQ9DB34 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chmp2aQ9DB34 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chmp2aQ9DB34 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chmp2aQ9DB34 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chmp2aQ9DB34 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chmp2aQ9DB34 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chmp2aQ9DB34 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Chmp2aQ9DB34 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Chmp2aQ9DB34 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC13.49□□□□□ -0.25
Chmp2aQ9DB34 Gm11978-201ENSMUST00000122315 466 ntBASIC13.49□□□□□ -0.25
Chmp2aQ9DB34 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC13.49□□□□□ -0.25
Chmp2aQ9DB34 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chmp2aQ9DB34 Gm4271-201ENSMUST00000174444 973 ntBASIC13.49□□□□□ -0.25
Chmp2aQ9DB34 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC13.49□□□□□ -0.25
Chmp2aQ9DB34 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Chmp2aQ9DB34 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Chmp2aQ9DB34 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chmp2aQ9DB34 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chmp2aQ9DB34 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Chmp2aQ9DB34 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Chmp2aQ9DB34 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chmp2aQ9DB34 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC13.49□□□□□ -0.25
Chmp2aQ9DB34 AC137842.1-201ENSMUST00000227896 2064 ntBASIC13.49□□□□□ -0.25
Chmp2aQ9DB34 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chmp2aQ9DB34 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chmp2aQ9DB34 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Chmp2aQ9DB34 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chmp2aQ9DB34 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chmp2aQ9DB34 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Chmp2aQ9DB34 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.49□□□□□ -0.25
Chmp2aQ9DB34 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Chmp2aQ9DB34 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp2aQ9DB34 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp2aQ9DB34 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp2aQ9DB34 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp2aQ9DB34 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp2aQ9DB34 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp2aQ9DB34 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp2aQ9DB34 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC13.48□□□□□ -0.25
Chmp2aQ9DB34 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp2aQ9DB34 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp2aQ9DB34 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp2aQ9DB34 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp2aQ9DB34 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp2aQ9DB34 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp2aQ9DB34 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp2aQ9DB34 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp2aQ9DB34 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp2aQ9DB34 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp2aQ9DB34 Gm16177-201ENSMUST00000120728 718 ntBASIC13.48□□□□□ -0.25
Chmp2aQ9DB34 Gm16479-201ENSMUST00000121706 932 ntBASIC13.48□□□□□ -0.25
Chmp2aQ9DB34 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC13.48□□□□□ -0.25
Chmp2aQ9DB34 Gm27731-201ENSMUST00000185192 107 ntBASIC13.48□□□□□ -0.25
Chmp2aQ9DB34 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp2aQ9DB34 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC13.48□□□□□ -0.25
Chmp2aQ9DB34 Gm43818-201ENSMUST00000200605 466 ntBASIC13.48□□□□□ -0.25
Chmp2aQ9DB34 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC13.48□□□□□ -0.25
Chmp2aQ9DB34 AC154276.1-201ENSMUST00000228874 1299 ntBASIC13.48□□□□□ -0.25
Chmp2aQ9DB34 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp2aQ9DB34 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp2aQ9DB34 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp2aQ9DB34 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp2aQ9DB34 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC13.48□□□□□ -0.25
Chmp2aQ9DB34 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp2aQ9DB34 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp2aQ9DB34 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp2aQ9DB34 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp2aQ9DB34 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp2aQ9DB34 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp2aQ9DB34 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp2aQ9DB34 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp2aQ9DB34 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp2aQ9DB34 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp2aQ9DB34 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp2aQ9DB34 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp2aQ9DB34 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Chmp2aQ9DB34 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp2aQ9DB34 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp2aQ9DB34 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp2aQ9DB34 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp2aQ9DB34 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp2aQ9DB34 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp2aQ9DB34 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp2aQ9DB34 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp2aQ9DB34 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp2aQ9DB34 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp2aQ9DB34 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC13.47□□□□□ -0.25
Chmp2aQ9DB34 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp2aQ9DB34 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp2aQ9DB34 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Chmp2aQ9DB34 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC13.47□□□□□ -0.25
Chmp2aQ9DB34 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp2aQ9DB34 Gm26185-201ENSMUST00000157692 266 ntBASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms