Protein–RNA interactions for Protein: Q9D8B4

Ndufa11, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11, mousemouse

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufa11Q9D8B4 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ndufa11Q9D8B4 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ndufa11Q9D8B4 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Ndufa11Q9D8B4 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC11.09□□□□□ -0.63
Ndufa11Q9D8B4 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
Ndufa11Q9D8B4 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Ndufa11Q9D8B4 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ndufa11Q9D8B4 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ndufa11Q9D8B4 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ndufa11Q9D8B4 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ndufa11Q9D8B4 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ndufa11Q9D8B4 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Ndufa11Q9D8B4 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ndufa11Q9D8B4 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ndufa11Q9D8B4 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Ndufa11Q9D8B4 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ndufa11Q9D8B4 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ndufa11Q9D8B4 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
Ndufa11Q9D8B4 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ndufa11Q9D8B4 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ndufa11Q9D8B4 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Ndufa11Q9D8B4 Gm10729-202ENSMUST00000193403 1375 ntBASIC11.09□□□□□ -0.63
Ndufa11Q9D8B4 Gm43081-201ENSMUST00000199082 1380 ntBASIC11.09□□□□□ -0.63
Ndufa11Q9D8B4 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Ndufa11Q9D8B4 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Ndufa11Q9D8B4 Gm16296-201ENSMUST00000159905 325 ntBASIC11.09□□□□□ -0.63
Ndufa11Q9D8B4 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC11.09□□□□□ -0.63
Ndufa11Q9D8B4 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC11.09□□□□□ -0.63
Ndufa11Q9D8B4 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Ndufa11Q9D8B4 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC11.09□□□□□ -0.63
Ndufa11Q9D8B4 AY036118-201ENSMUST00000200021 923 ntBASIC11.09□□□□□ -0.63
Ndufa11Q9D8B4 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC11.09□□□□□ -0.63
Ndufa11Q9D8B4 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
Ndufa11Q9D8B4 AC125486.1-201ENSMUST00000218701 320 ntBASIC11.09□□□□□ -0.63
Ndufa11Q9D8B4 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ndufa11Q9D8B4 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ndufa11Q9D8B4 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC11.09□□□□□ -0.63
Ndufa11Q9D8B4 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ndufa11Q9D8B4 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ndufa11Q9D8B4 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ndufa11Q9D8B4 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Ndufa11Q9D8B4 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Ndufa11Q9D8B4 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ndufa11Q9D8B4 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Ndufa11Q9D8B4 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Ndufa11Q9D8B4 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ndufa11Q9D8B4 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ndufa11Q9D8B4 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ndufa11Q9D8B4 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ndufa11Q9D8B4 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ndufa11Q9D8B4 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ndufa11Q9D8B4 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ndufa11Q9D8B4 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ndufa11Q9D8B4 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ndufa11Q9D8B4 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ndufa11Q9D8B4 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ndufa11Q9D8B4 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ndufa11Q9D8B4 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ndufa11Q9D8B4 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Ndufa11Q9D8B4 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC11.08□□□□□ -0.64
Ndufa11Q9D8B4 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Ndufa11Q9D8B4 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Ndufa11Q9D8B4 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC11.08□□□□□ -0.64
Ndufa11Q9D8B4 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ndufa11Q9D8B4 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ndufa11Q9D8B4 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC11.08□□□□□ -0.64
Ndufa11Q9D8B4 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC11.08□□□□□ -0.64
Ndufa11Q9D8B4 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC11.08□□□□□ -0.64
Ndufa11Q9D8B4 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC11.08□□□□□ -0.64
Ndufa11Q9D8B4 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC11.08□□□□□ -0.64
Ndufa11Q9D8B4 D9Wsu149-201ENSMUST00000214169 594 ntBASIC11.08□□□□□ -0.64
Ndufa11Q9D8B4 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ndufa11Q9D8B4 AC159819.2-201ENSMUST00000216151 342 ntBASIC11.08□□□□□ -0.64
Ndufa11Q9D8B4 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC11.08□□□□□ -0.64
Ndufa11Q9D8B4 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ndufa11Q9D8B4 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ndufa11Q9D8B4 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ndufa11Q9D8B4 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ndufa11Q9D8B4 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ndufa11Q9D8B4 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ndufa11Q9D8B4 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ndufa11Q9D8B4 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC11.08□□□□□ -0.64
Ndufa11Q9D8B4 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC11.08□□□□□ -0.64
Ndufa11Q9D8B4 Gm45779-201ENSMUST00000212189 4064 ntBASIC11.08□□□□□ -0.64
Ndufa11Q9D8B4 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ndufa11Q9D8B4 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC11.08□□□□□ -0.64
Ndufa11Q9D8B4 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ndufa11Q9D8B4 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ndufa11Q9D8B4 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ndufa11Q9D8B4 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC11.08□□□□□ -0.64
Ndufa11Q9D8B4 Gm45133-201ENSMUST00000207548 2773 ntBASIC11.08□□□□□ -0.64
Ndufa11Q9D8B4 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ndufa11Q9D8B4 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC11.08□□□□□ -0.64
Ndufa11Q9D8B4 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ndufa11Q9D8B4 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ndufa11Q9D8B4 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ndufa11Q9D8B4 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ndufa11Q9D8B4 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ndufa11Q9D8B4 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ndufa11Q9D8B4 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms