Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
U2af1Q9D883 Gm18222-201ENSMUST00000202416 1387 ntBASIC16.98■□□□□ 0.31
U2af1Q9D883 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
U2af1Q9D883 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC16.98■□□□□ 0.31
U2af1Q9D883 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
U2af1Q9D883 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
U2af1Q9D883 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
U2af1Q9D883 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
U2af1Q9D883 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
U2af1Q9D883 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
U2af1Q9D883 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
U2af1Q9D883 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
U2af1Q9D883 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC16.97■□□□□ 0.31
U2af1Q9D883 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
U2af1Q9D883 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
U2af1Q9D883 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
U2af1Q9D883 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
U2af1Q9D883 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
U2af1Q9D883 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
U2af1Q9D883 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
U2af1Q9D883 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
U2af1Q9D883 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
U2af1Q9D883 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
U2af1Q9D883 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC16.97■□□□□ 0.31
U2af1Q9D883 Gm15198-201ENSMUST00000117283 177 ntBASIC16.97■□□□□ 0.31
U2af1Q9D883 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
U2af1Q9D883 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC16.97■□□□□ 0.31
U2af1Q9D883 Gm27516-201ENSMUST00000184237 98 ntBASIC16.97■□□□□ 0.31
U2af1Q9D883 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
U2af1Q9D883 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC16.97■□□□□ 0.31
U2af1Q9D883 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
U2af1Q9D883 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
U2af1Q9D883 Gm5781-201ENSMUST00000219792 443 ntBASIC16.97■□□□□ 0.31
U2af1Q9D883 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
U2af1Q9D883 Mir339-201ENSMUST00000083659 96 ntBASIC16.97■□□□□ 0.31
U2af1Q9D883 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
U2af1Q9D883 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC16.97■□□□□ 0.31
U2af1Q9D883 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
U2af1Q9D883 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
U2af1Q9D883 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
U2af1Q9D883 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
U2af1Q9D883 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
U2af1Q9D883 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
U2af1Q9D883 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
U2af1Q9D883 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
U2af1Q9D883 Ntrk2-209ENSMUST00000225950 2640 ntBASIC16.97■□□□□ 0.31
U2af1Q9D883 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
U2af1Q9D883 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
U2af1Q9D883 Gm43570-201ENSMUST00000199951 3688 ntBASIC16.97■□□□□ 0.31
U2af1Q9D883 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
U2af1Q9D883 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC16.96■□□□□ 0.31
U2af1Q9D883 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
U2af1Q9D883 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
U2af1Q9D883 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
U2af1Q9D883 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
U2af1Q9D883 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC16.96■□□□□ 0.31
U2af1Q9D883 Gm18916-201ENSMUST00000198264 1246 ntBASIC16.96■□□□□ 0.31
U2af1Q9D883 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC16.96■□□□□ 0.31
U2af1Q9D883 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC16.96■□□□□ 0.31
U2af1Q9D883 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC16.96■□□□□ 0.31
U2af1Q9D883 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
U2af1Q9D883 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
U2af1Q9D883 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
U2af1Q9D883 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
U2af1Q9D883 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
U2af1Q9D883 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
U2af1Q9D883 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
U2af1Q9D883 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC16.96■□□□□ 0.31
U2af1Q9D883 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
U2af1Q9D883 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
U2af1Q9D883 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
U2af1Q9D883 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
U2af1Q9D883 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
U2af1Q9D883 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
U2af1Q9D883 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
U2af1Q9D883 Gm8228-201ENSMUST00000189949 2192 ntBASIC16.95■□□□□ 0.3
U2af1Q9D883 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
U2af1Q9D883 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
U2af1Q9D883 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC16.95■□□□□ 0.3
U2af1Q9D883 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
U2af1Q9D883 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
U2af1Q9D883 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
U2af1Q9D883 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
U2af1Q9D883 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
U2af1Q9D883 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
U2af1Q9D883 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
U2af1Q9D883 Mir8109-201ENSMUST00000184375 117 ntBASIC16.95■□□□□ 0.3
U2af1Q9D883 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC16.95■□□□□ 0.3
U2af1Q9D883 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
U2af1Q9D883 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
U2af1Q9D883 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC16.95■□□□□ 0.3
U2af1Q9D883 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
U2af1Q9D883 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC16.95■□□□□ 0.3
U2af1Q9D883 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC16.95■□□□□ 0.3
U2af1Q9D883 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
U2af1Q9D883 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
U2af1Q9D883 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
U2af1Q9D883 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
U2af1Q9D883 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
U2af1Q9D883 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms