Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chmp5Q9D7S9 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC16.14■□□□□ 0.17
Chmp5Q9D7S9 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Chmp5Q9D7S9 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Chmp5Q9D7S9 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Chmp5Q9D7S9 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC16.14■□□□□ 0.17
Chmp5Q9D7S9 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Chmp5Q9D7S9 Gm28760-201ENSMUST00000185995 736 ntBASIC16.14■□□□□ 0.17
Chmp5Q9D7S9 Gm38223-201ENSMUST00000194484 695 ntBASIC16.14■□□□□ 0.17
Chmp5Q9D7S9 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC16.14■□□□□ 0.17
Chmp5Q9D7S9 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Chmp5Q9D7S9 AC135669.1-202ENSMUST00000216742 540 ntBASIC16.14■□□□□ 0.17
Chmp5Q9D7S9 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Chmp5Q9D7S9 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Chmp5Q9D7S9 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chmp5Q9D7S9 AC154262.2-202ENSMUST00000225158 1331 ntBASIC16.14■□□□□ 0.17
Chmp5Q9D7S9 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chmp5Q9D7S9 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chmp5Q9D7S9 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Chmp5Q9D7S9 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Chmp5Q9D7S9 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chmp5Q9D7S9 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Chmp5Q9D7S9 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chmp5Q9D7S9 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Chmp5Q9D7S9 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chmp5Q9D7S9 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC16.13■□□□□ 0.17
Chmp5Q9D7S9 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chmp5Q9D7S9 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chmp5Q9D7S9 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chmp5Q9D7S9 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chmp5Q9D7S9 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chmp5Q9D7S9 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Chmp5Q9D7S9 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Chmp5Q9D7S9 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
Chmp5Q9D7S9 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC16.13■□□□□ 0.17
Chmp5Q9D7S9 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chmp5Q9D7S9 Gm12416-201ENSMUST00000120911 1008 ntBASIC16.13■□□□□ 0.17
Chmp5Q9D7S9 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC16.13■□□□□ 0.17
Chmp5Q9D7S9 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC16.13■□□□□ 0.17
Chmp5Q9D7S9 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Chmp5Q9D7S9 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chmp5Q9D7S9 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chmp5Q9D7S9 Hist1h2al-201ENSMUST00000091708 339 ntBASIC16.13■□□□□ 0.17
Chmp5Q9D7S9 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
Chmp5Q9D7S9 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chmp5Q9D7S9 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Chmp5Q9D7S9 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chmp5Q9D7S9 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chmp5Q9D7S9 Nupl1-206ENSMUST00000225111 2936 ntBASIC16.13■□□□□ 0.17
Chmp5Q9D7S9 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chmp5Q9D7S9 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chmp5Q9D7S9 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chmp5Q9D7S9 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chmp5Q9D7S9 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chmp5Q9D7S9 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC16.12■□□□□ 0.17
Chmp5Q9D7S9 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chmp5Q9D7S9 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chmp5Q9D7S9 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chmp5Q9D7S9 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chmp5Q9D7S9 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC16.12■□□□□ 0.17
Chmp5Q9D7S9 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chmp5Q9D7S9 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Chmp5Q9D7S9 Gm5303-201ENSMUST00000117943 1252 ntBASIC16.12■□□□□ 0.17
Chmp5Q9D7S9 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC16.12■□□□□ 0.17
Chmp5Q9D7S9 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC16.12■□□□□ 0.17
Chmp5Q9D7S9 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC16.12■□□□□ 0.17
Chmp5Q9D7S9 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
Chmp5Q9D7S9 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chmp5Q9D7S9 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chmp5Q9D7S9 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chmp5Q9D7S9 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chmp5Q9D7S9 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Chmp5Q9D7S9 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC16.12■□□□□ 0.17
Chmp5Q9D7S9 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chmp5Q9D7S9 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chmp5Q9D7S9 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Chmp5Q9D7S9 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chmp5Q9D7S9 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Chmp5Q9D7S9 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chmp5Q9D7S9 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC16.12■□□□□ 0.17
Chmp5Q9D7S9 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chmp5Q9D7S9 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC16.12■□□□□ 0.17
Chmp5Q9D7S9 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chmp5Q9D7S9 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chmp5Q9D7S9 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chmp5Q9D7S9 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chmp5Q9D7S9 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Chmp5Q9D7S9 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
Chmp5Q9D7S9 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Chmp5Q9D7S9 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
Chmp5Q9D7S9 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC16.12■□□□□ 0.17
Chmp5Q9D7S9 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC16.12■□□□□ 0.17
Chmp5Q9D7S9 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chmp5Q9D7S9 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Chmp5Q9D7S9 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chmp5Q9D7S9 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Chmp5Q9D7S9 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chmp5Q9D7S9 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Chmp5Q9D7S9 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Chmp5Q9D7S9 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms