Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim42Q9D2H5 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim42Q9D2H5 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim42Q9D2H5 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Trim42Q9D2H5 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim42Q9D2H5 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim42Q9D2H5 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim42Q9D2H5 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim42Q9D2H5 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Trim42Q9D2H5 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim42Q9D2H5 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim42Q9D2H5 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim42Q9D2H5 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim42Q9D2H5 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim42Q9D2H5 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim42Q9D2H5 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Trim42Q9D2H5 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim42Q9D2H5 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim42Q9D2H5 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.96□□□□□ -0.33
Trim42Q9D2H5 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim42Q9D2H5 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim42Q9D2H5 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.96□□□□□ -0.33
Trim42Q9D2H5 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Trim42Q9D2H5 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Trim42Q9D2H5 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC12.96□□□□□ -0.33
Trim42Q9D2H5 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Trim42Q9D2H5 Gm7820-201ENSMUST00000121012 1052 ntBASIC12.96□□□□□ -0.33
Trim42Q9D2H5 CT943659.1-201ENSMUST00000215459 326 ntBASIC12.96□□□□□ -0.33
Trim42Q9D2H5 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Trim42Q9D2H5 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim42Q9D2H5 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim42Q9D2H5 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim42Q9D2H5 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim42Q9D2H5 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim42Q9D2H5 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.96□□□□□ -0.34
Trim42Q9D2H5 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim42Q9D2H5 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim42Q9D2H5 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim42Q9D2H5 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim42Q9D2H5 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim42Q9D2H5 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim42Q9D2H5 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.96□□□□□ -0.34
Trim42Q9D2H5 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim42Q9D2H5 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim42Q9D2H5 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim42Q9D2H5 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim42Q9D2H5 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Trim42Q9D2H5 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim42Q9D2H5 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trim42Q9D2H5 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Trim42Q9D2H5 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim42Q9D2H5 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim42Q9D2H5 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.95□□□□□ -0.34
Trim42Q9D2H5 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trim42Q9D2H5 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim42Q9D2H5 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trim42Q9D2H5 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim42Q9D2H5 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim42Q9D2H5 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Trim42Q9D2H5 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.95□□□□□ -0.34
Trim42Q9D2H5 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.95□□□□□ -0.34
Trim42Q9D2H5 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim42Q9D2H5 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC12.95□□□□□ -0.34
Trim42Q9D2H5 Gm13365-201ENSMUST00000121188 973 ntBASIC12.95□□□□□ -0.34
Trim42Q9D2H5 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.95□□□□□ -0.34
Trim42Q9D2H5 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC12.95□□□□□ -0.34
Trim42Q9D2H5 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Trim42Q9D2H5 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trim42Q9D2H5 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.95□□□□□ -0.34
Trim42Q9D2H5 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC12.95□□□□□ -0.34
Trim42Q9D2H5 Mir6990-201ENSMUST00000183724 91 ntBASIC12.95□□□□□ -0.34
Trim42Q9D2H5 Gm43125-201ENSMUST00000201724 730 ntBASIC12.95□□□□□ -0.34
Trim42Q9D2H5 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC12.95□□□□□ -0.34
Trim42Q9D2H5 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim42Q9D2H5 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim42Q9D2H5 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Trim42Q9D2H5 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim42Q9D2H5 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Trim42Q9D2H5 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim42Q9D2H5 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim42Q9D2H5 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim42Q9D2H5 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim42Q9D2H5 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trim42Q9D2H5 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim42Q9D2H5 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim42Q9D2H5 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim42Q9D2H5 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim42Q9D2H5 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim42Q9D2H5 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim42Q9D2H5 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Trim42Q9D2H5 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim42Q9D2H5 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim42Q9D2H5 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.94□□□□□ -0.34
Trim42Q9D2H5 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.94□□□□□ -0.34
Trim42Q9D2H5 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim42Q9D2H5 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim42Q9D2H5 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim42Q9D2H5 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim42Q9D2H5 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim42Q9D2H5 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms