Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC13.26□□□□□ -0.29
Vps28Q9D1C8 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC13.26□□□□□ -0.29
Vps28Q9D1C8 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps28Q9D1C8 Gm17420-201ENSMUST00000164753 153 ntBASIC13.26□□□□□ -0.29
Vps28Q9D1C8 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps28Q9D1C8 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC13.26□□□□□ -0.29
Vps28Q9D1C8 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps28Q9D1C8 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps28Q9D1C8 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Vps28Q9D1C8 Gm38297-201ENSMUST00000195122 1057 ntBASIC13.26□□□□□ -0.29
Vps28Q9D1C8 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Vps28Q9D1C8 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.26□□□□□ -0.29
Vps28Q9D1C8 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Vps28Q9D1C8 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps28Q9D1C8 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps28Q9D1C8 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps28Q9D1C8 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps28Q9D1C8 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps28Q9D1C8 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps28Q9D1C8 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps28Q9D1C8 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps28Q9D1C8 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps28Q9D1C8 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps28Q9D1C8 Gm5620-201ENSMUST00000077991 1348 ntBASIC13.26□□□□□ -0.29
Vps28Q9D1C8 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps28Q9D1C8 n-R5s77-201ENSMUST00000083757 119 ntBASIC13.26□□□□□ -0.29
Vps28Q9D1C8 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Vps28Q9D1C8 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Vps28Q9D1C8 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps28Q9D1C8 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps28Q9D1C8 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps28Q9D1C8 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
Vps28Q9D1C8 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps28Q9D1C8 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps28Q9D1C8 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
Vps28Q9D1C8 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Vps28Q9D1C8 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps28Q9D1C8 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC13.26□□□□□ -0.29
Vps28Q9D1C8 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC13.25□□□□□ -0.29
Vps28Q9D1C8 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC13.25□□□□□ -0.29
Vps28Q9D1C8 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps28Q9D1C8 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Vps28Q9D1C8 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Vps28Q9D1C8 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps28Q9D1C8 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps28Q9D1C8 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps28Q9D1C8 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps28Q9D1C8 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps28Q9D1C8 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC13.25□□□□□ -0.29
Vps28Q9D1C8 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC13.25□□□□□ -0.29
Vps28Q9D1C8 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC13.25□□□□□ -0.29
Vps28Q9D1C8 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Vps28Q9D1C8 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Vps28Q9D1C8 Gm27514-201ENSMUST00000183692 110 ntBASIC13.25□□□□□ -0.29
Vps28Q9D1C8 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Vps28Q9D1C8 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC13.25□□□□□ -0.29
Vps28Q9D1C8 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Vps28Q9D1C8 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps28Q9D1C8 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps28Q9D1C8 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13.25□□□□□ -0.29
Vps28Q9D1C8 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps28Q9D1C8 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.25□□□□□ -0.29
Vps28Q9D1C8 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Vps28Q9D1C8 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps28Q9D1C8 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Vps28Q9D1C8 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC13.25□□□□□ -0.29
Vps28Q9D1C8 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps28Q9D1C8 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps28Q9D1C8 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC13.25□□□□□ -0.29
Vps28Q9D1C8 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps28Q9D1C8 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps28Q9D1C8 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps28Q9D1C8 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps28Q9D1C8 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps28Q9D1C8 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Vps28Q9D1C8 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps28Q9D1C8 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Vps28Q9D1C8 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Vps28Q9D1C8 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps28Q9D1C8 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps28Q9D1C8 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps28Q9D1C8 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Vps28Q9D1C8 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Vps28Q9D1C8 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps28Q9D1C8 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps28Q9D1C8 Gm5896-201ENSMUST00000189662 1024 ntBASIC13.24□□□□□ -0.29
Vps28Q9D1C8 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC13.24□□□□□ -0.29
Vps28Q9D1C8 Gm43630-201ENSMUST00000201550 776 ntBASIC13.24□□□□□ -0.29
Vps28Q9D1C8 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC13.24□□□□□ -0.29
Vps28Q9D1C8 Tyms-ps-201ENSMUST00000219550 915 ntBASIC13.24□□□□□ -0.29
Vps28Q9D1C8 Gm19163-201ENSMUST00000223313 780 ntBASIC13.24□□□□□ -0.29
Vps28Q9D1C8 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Vps28Q9D1C8 Gm9899-201ENSMUST00000065519 555 ntBASIC13.24□□□□□ -0.29
Vps28Q9D1C8 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Vps28Q9D1C8 Gm10478-201ENSMUST00000084451 396 ntBASIC13.24□□□□□ -0.29
Vps28Q9D1C8 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps28Q9D1C8 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Vps28Q9D1C8 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Vps28Q9D1C8 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Vps28Q9D1C8 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms