Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Rpa3Q9CQ71 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rpa3Q9CQ71 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC13.68□□□□□ -0.22
Rpa3Q9CQ71 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpa3Q9CQ71 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpa3Q9CQ71 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpa3Q9CQ71 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC13.68□□□□□ -0.22
Rpa3Q9CQ71 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpa3Q9CQ71 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpa3Q9CQ71 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rpa3Q9CQ71 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpa3Q9CQ71 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC13.68□□□□□ -0.22
Rpa3Q9CQ71 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Rpa3Q9CQ71 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rpa3Q9CQ71 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rpa3Q9CQ71 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpa3Q9CQ71 Mir686-201ENSMUST00000102174 109 ntBASIC13.68□□□□□ -0.22
Rpa3Q9CQ71 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Rpa3Q9CQ71 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Rpa3Q9CQ71 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpa3Q9CQ71 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rpa3Q9CQ71 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC13.68□□□□□ -0.22
Rpa3Q9CQ71 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpa3Q9CQ71 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpa3Q9CQ71 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Rpa3Q9CQ71 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
Rpa3Q9CQ71 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpa3Q9CQ71 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rpa3Q9CQ71 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rpa3Q9CQ71 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpa3Q9CQ71 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rpa3Q9CQ71 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Rpa3Q9CQ71 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
Rpa3Q9CQ71 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpa3Q9CQ71 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpa3Q9CQ71 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rpa3Q9CQ71 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpa3Q9CQ71 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
Rpa3Q9CQ71 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Rpa3Q9CQ71 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.67□□□□□ -0.22
Rpa3Q9CQ71 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Rpa3Q9CQ71 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.67□□□□□ -0.22
Rpa3Q9CQ71 Gm38355-201ENSMUST00000192514 1570 ntBASIC13.67□□□□□ -0.22
Rpa3Q9CQ71 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpa3Q9CQ71 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC13.67□□□□□ -0.22
Rpa3Q9CQ71 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Rpa3Q9CQ71 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpa3Q9CQ71 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpa3Q9CQ71 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC13.67□□□□□ -0.22
Rpa3Q9CQ71 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC13.67□□□□□ -0.22
Rpa3Q9CQ71 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rpa3Q9CQ71 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpa3Q9CQ71 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rpa3Q9CQ71 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpa3Q9CQ71 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpa3Q9CQ71 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpa3Q9CQ71 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rpa3Q9CQ71 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpa3Q9CQ71 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpa3Q9CQ71 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpa3Q9CQ71 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpa3Q9CQ71 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpa3Q9CQ71 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpa3Q9CQ71 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpa3Q9CQ71 Zscan30-202ENSMUST00000224144 1458 ntBASIC13.67□□□□□ -0.22
Rpa3Q9CQ71 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rpa3Q9CQ71 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpa3Q9CQ71 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.67□□□□□ -0.22
Rpa3Q9CQ71 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpa3Q9CQ71 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpa3Q9CQ71 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rpa3Q9CQ71 Gm14608-201ENSMUST00000120030 1553 ntBASIC13.66□□□□□ -0.22
Rpa3Q9CQ71 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpa3Q9CQ71 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpa3Q9CQ71 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpa3Q9CQ71 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpa3Q9CQ71 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpa3Q9CQ71 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpa3Q9CQ71 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpa3Q9CQ71 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpa3Q9CQ71 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Rpa3Q9CQ71 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpa3Q9CQ71 Gm37324-201ENSMUST00000194500 4504 ntBASIC13.66□□□□□ -0.22
Rpa3Q9CQ71 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC13.66□□□□□ -0.22
Rpa3Q9CQ71 Gm17150-201ENSMUST00000165577 381 ntBASIC13.66□□□□□ -0.22
Rpa3Q9CQ71 Gm4271-201ENSMUST00000174444 973 ntBASIC13.66□□□□□ -0.22
Rpa3Q9CQ71 Gm9061-201ENSMUST00000182707 1006 ntBASIC13.66□□□□□ -0.22
Rpa3Q9CQ71 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC13.66□□□□□ -0.22
Rpa3Q9CQ71 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rpa3Q9CQ71 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC13.66□□□□□ -0.22
Rpa3Q9CQ71 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpa3Q9CQ71 AC138604.1-201ENSMUST00000226969 739 ntBASIC13.66□□□□□ -0.22
Rpa3Q9CQ71 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpa3Q9CQ71 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Rpa3Q9CQ71 Gm10146-201ENSMUST00000072739 309 ntBASIC13.66□□□□□ -0.22
Rpa3Q9CQ71 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpa3Q9CQ71 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Rpa3Q9CQ71 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.66□□□□□ -0.22
Rpa3Q9CQ71 Gm15222-202ENSMUST00000228667 1726 ntBASIC13.66□□□□□ -0.22
Rpa3Q9CQ71 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms