Protein–RNA interactions for Protein: Q99NB9

Sf3b1, Splicing factor 3B subunit 1, mousemouse

Known RBP Predictions only

Length 1,304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1Q99NB9 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.72□□□□□ -0.21
Sf3b1Q99NB9 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sf3b1Q99NB9 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Sf3b1Q99NB9 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sf3b1Q99NB9 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Sf3b1Q99NB9 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sf3b1Q99NB9 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sf3b1Q99NB9 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sf3b1Q99NB9 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Sf3b1Q99NB9 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sf3b1Q99NB9 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Sf3b1Q99NB9 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Sf3b1Q99NB9 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Sf3b1Q99NB9 Snord83b-201ENSMUST00000104546 94 ntBASIC13.71□□□□□ -0.21
Sf3b1Q99NB9 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Sf3b1Q99NB9 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC13.71□□□□□ -0.21
Sf3b1Q99NB9 Gm12502-201ENSMUST00000120197 444 ntBASIC13.71□□□□□ -0.21
Sf3b1Q99NB9 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC13.71□□□□□ -0.21
Sf3b1Q99NB9 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC13.71□□□□□ -0.21
Sf3b1Q99NB9 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sf3b1Q99NB9 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Sf3b1Q99NB9 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Sf3b1Q99NB9 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC13.71□□□□□ -0.21
Sf3b1Q99NB9 Gm19931-201ENSMUST00000198920 368 ntBASIC13.71□□□□□ -0.21
Sf3b1Q99NB9 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Sf3b1Q99NB9 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC13.71□□□□□ -0.21
Sf3b1Q99NB9 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Sf3b1Q99NB9 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Sf3b1Q99NB9 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sf3b1Q99NB9 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sf3b1Q99NB9 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Sf3b1Q99NB9 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sf3b1Q99NB9 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sf3b1Q99NB9 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sf3b1Q99NB9 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sf3b1Q99NB9 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Sf3b1Q99NB9 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sf3b1Q99NB9 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sf3b1Q99NB9 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Sf3b1Q99NB9 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Sf3b1Q99NB9 Gm44775-201ENSMUST00000207266 1456 ntBASIC13.71□□□□□ -0.22
Sf3b1Q99NB9 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.71□□□□□ -0.22
Sf3b1Q99NB9 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Sf3b1Q99NB9 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Sf3b1Q99NB9 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Sf3b1Q99NB9 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC13.71□□□□□ -0.22
Sf3b1Q99NB9 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sf3b1Q99NB9 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Sf3b1Q99NB9 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Sf3b1Q99NB9 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sf3b1Q99NB9 Gm9061-201ENSMUST00000182707 1006 ntBASIC13.7□□□□□ -0.22
Sf3b1Q99NB9 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC13.7□□□□□ -0.22
Sf3b1Q99NB9 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sf3b1Q99NB9 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Sf3b1Q99NB9 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.7□□□□□ -0.22
Sf3b1Q99NB9 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sf3b1Q99NB9 Gm5466-201ENSMUST00000119395 1890 ntBASIC13.7□□□□□ -0.22
Sf3b1Q99NB9 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sf3b1Q99NB9 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.7□□□□□ -0.22
Sf3b1Q99NB9 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sf3b1Q99NB9 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Sf3b1Q99NB9 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Sf3b1Q99NB9 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sf3b1Q99NB9 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.7□□□□□ -0.22
Sf3b1Q99NB9 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.7□□□□□ -0.22
Sf3b1Q99NB9 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Sf3b1Q99NB9 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sf3b1Q99NB9 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Sf3b1Q99NB9 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sf3b1Q99NB9 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sf3b1Q99NB9 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Sf3b1Q99NB9 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Sf3b1Q99NB9 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Sf3b1Q99NB9 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sf3b1Q99NB9 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC13.69□□□□□ -0.22
Sf3b1Q99NB9 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sf3b1Q99NB9 Gm22323-201ENSMUST00000103832 109 ntBASIC13.69□□□□□ -0.22
Sf3b1Q99NB9 Mir877-201ENSMUST00000104738 85 ntBASIC13.69□□□□□ -0.22
Sf3b1Q99NB9 Gm15236-201ENSMUST00000117309 379 ntBASIC13.69□□□□□ -0.22
Sf3b1Q99NB9 Gm13316-201ENSMUST00000140537 691 ntBASIC13.69□□□□□ -0.22
Sf3b1Q99NB9 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Sf3b1Q99NB9 Ighv1-62-201ENSMUST00000193406 350 ntBASIC13.69□□□□□ -0.22
Sf3b1Q99NB9 Gm43416-201ENSMUST00000201916 1015 ntBASIC13.69□□□□□ -0.22
Sf3b1Q99NB9 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sf3b1Q99NB9 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sf3b1Q99NB9 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Sf3b1Q99NB9 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Sf3b1Q99NB9 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Sf3b1Q99NB9 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Sf3b1Q99NB9 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sf3b1Q99NB9 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sf3b1Q99NB9 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sf3b1Q99NB9 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sf3b1Q99NB9 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Sf3b1Q99NB9 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Sf3b1Q99NB9 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sf3b1Q99NB9 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sf3b1Q99NB9 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sf3b1Q99NB9 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sf3b1Q99NB9 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms