Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Nkd1Q99MH6 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC12.19□□□□□ -0.46
Nkd1Q99MH6 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC12.19□□□□□ -0.46
Nkd1Q99MH6 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Nkd1Q99MH6 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkd1Q99MH6 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkd1Q99MH6 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Nkd1Q99MH6 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkd1Q99MH6 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkd1Q99MH6 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkd1Q99MH6 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkd1Q99MH6 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkd1Q99MH6 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkd1Q99MH6 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkd1Q99MH6 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkd1Q99MH6 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.19□□□□□ -0.46
Nkd1Q99MH6 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkd1Q99MH6 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkd1Q99MH6 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkd1Q99MH6 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Nkd1Q99MH6 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Nkd1Q99MH6 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkd1Q99MH6 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Nkd1Q99MH6 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkd1Q99MH6 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkd1Q99MH6 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkd1Q99MH6 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkd1Q99MH6 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nkd1Q99MH6 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nkd1Q99MH6 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.18□□□□□ -0.46
Nkd1Q99MH6 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkd1Q99MH6 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.18□□□□□ -0.46
Nkd1Q99MH6 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkd1Q99MH6 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkd1Q99MH6 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.18□□□□□ -0.46
Nkd1Q99MH6 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkd1Q99MH6 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.18□□□□□ -0.46
Nkd1Q99MH6 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkd1Q99MH6 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkd1Q99MH6 Gm14057-201ENSMUST00000120631 482 ntBASIC12.18□□□□□ -0.46
Nkd1Q99MH6 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nkd1Q99MH6 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.18□□□□□ -0.46
Nkd1Q99MH6 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Nkd1Q99MH6 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Nkd1Q99MH6 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC12.18□□□□□ -0.46
Nkd1Q99MH6 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nkd1Q99MH6 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC12.18□□□□□ -0.46
Nkd1Q99MH6 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nkd1Q99MH6 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.18□□□□□ -0.46
Nkd1Q99MH6 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.18□□□□□ -0.46
Nkd1Q99MH6 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.18□□□□□ -0.46
Nkd1Q99MH6 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nkd1Q99MH6 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nkd1Q99MH6 Ldb3-207ENSMUST00000227819 1499 ntBASIC12.18□□□□□ -0.46
Nkd1Q99MH6 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Nkd1Q99MH6 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkd1Q99MH6 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkd1Q99MH6 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Nkd1Q99MH6 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkd1Q99MH6 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkd1Q99MH6 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkd1Q99MH6 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkd1Q99MH6 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.18□□□□□ -0.46
Nkd1Q99MH6 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkd1Q99MH6 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkd1Q99MH6 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkd1Q99MH6 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkd1Q99MH6 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkd1Q99MH6 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.18□□□□□ -0.46
Nkd1Q99MH6 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nkd1Q99MH6 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nkd1Q99MH6 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkd1Q99MH6 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkd1Q99MH6 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkd1Q99MH6 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkd1Q99MH6 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Nkd1Q99MH6 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Nkd1Q99MH6 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkd1Q99MH6 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Nkd1Q99MH6 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Nkd1Q99MH6 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.17□□□□□ -0.46
Nkd1Q99MH6 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nkd1Q99MH6 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkd1Q99MH6 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nkd1Q99MH6 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
Nkd1Q99MH6 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkd1Q99MH6 Gm15920-201ENSMUST00000118998 402 ntBASIC12.17□□□□□ -0.46
Nkd1Q99MH6 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.17□□□□□ -0.46
Nkd1Q99MH6 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkd1Q99MH6 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkd1Q99MH6 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.17□□□□□ -0.46
Nkd1Q99MH6 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC12.17□□□□□ -0.46
Nkd1Q99MH6 Gm42612-201ENSMUST00000197986 623 ntBASIC12.17□□□□□ -0.46
Nkd1Q99MH6 Gm43170-201ENSMUST00000199827 612 ntBASIC12.17□□□□□ -0.46
Nkd1Q99MH6 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.17□□□□□ -0.46
Nkd1Q99MH6 Gm19220-201ENSMUST00000222682 803 ntBASIC12.17□□□□□ -0.46
Nkd1Q99MH6 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.17□□□□□ -0.46
Nkd1Q99MH6 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkd1Q99MH6 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkd1Q99MH6 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms