Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC15.88■□□□□ 0.13
RtcbQ99LF4 Gm44126-201ENSMUST00000204831 514 ntBASIC15.88■□□□□ 0.13
RtcbQ99LF4 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
RtcbQ99LF4 Gm39404-201ENSMUST00000216350 313 ntBASIC15.88■□□□□ 0.13
RtcbQ99LF4 Ntng1-201ENSMUST00000051253 327 ntBASIC15.88■□□□□ 0.13
RtcbQ99LF4 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RtcbQ99LF4 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
RtcbQ99LF4 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RtcbQ99LF4 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
RtcbQ99LF4 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RtcbQ99LF4 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RtcbQ99LF4 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RtcbQ99LF4 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RtcbQ99LF4 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
RtcbQ99LF4 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RtcbQ99LF4 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RtcbQ99LF4 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC15.88■□□□□ 0.13
RtcbQ99LF4 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
RtcbQ99LF4 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RtcbQ99LF4 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RtcbQ99LF4 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
RtcbQ99LF4 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC15.88■□□□□ 0.13
RtcbQ99LF4 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RtcbQ99LF4 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RtcbQ99LF4 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RtcbQ99LF4 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RtcbQ99LF4 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RtcbQ99LF4 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RtcbQ99LF4 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
RtcbQ99LF4 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC15.87■□□□□ 0.13
RtcbQ99LF4 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RtcbQ99LF4 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC15.87■□□□□ 0.13
RtcbQ99LF4 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC15.87■□□□□ 0.13
RtcbQ99LF4 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RtcbQ99LF4 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC15.87■□□□□ 0.13
RtcbQ99LF4 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC15.87■□□□□ 0.13
RtcbQ99LF4 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RtcbQ99LF4 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RtcbQ99LF4 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RtcbQ99LF4 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
RtcbQ99LF4 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RtcbQ99LF4 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RtcbQ99LF4 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
RtcbQ99LF4 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
RtcbQ99LF4 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RtcbQ99LF4 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
RtcbQ99LF4 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RtcbQ99LF4 Gm10729-202ENSMUST00000193403 1375 ntBASIC15.87■□□□□ 0.13
RtcbQ99LF4 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC15.87■□□□□ 0.13
RtcbQ99LF4 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RtcbQ99LF4 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RtcbQ99LF4 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RtcbQ99LF4 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
RtcbQ99LF4 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
RtcbQ99LF4 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RtcbQ99LF4 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
RtcbQ99LF4 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
RtcbQ99LF4 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RtcbQ99LF4 Gm23949-201ENSMUST00000104027 127 ntBASIC15.86■□□□□ 0.13
RtcbQ99LF4 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RtcbQ99LF4 Gm15711-201ENSMUST00000118889 535 ntBASIC15.86■□□□□ 0.13
RtcbQ99LF4 Gm13813-201ENSMUST00000120998 787 ntBASIC15.86■□□□□ 0.13
RtcbQ99LF4 Gm11450-201ENSMUST00000121144 333 ntBASIC15.86■□□□□ 0.13
RtcbQ99LF4 Gm11597-201ENSMUST00000121423 964 ntBASIC15.86■□□□□ 0.13
RtcbQ99LF4 Gm12208-201ENSMUST00000122004 163 ntBASIC15.86■□□□□ 0.13
RtcbQ99LF4 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC15.86■□□□□ 0.13
RtcbQ99LF4 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC15.86■□□□□ 0.13
RtcbQ99LF4 Gm19459-201ENSMUST00000176240 835 ntBASIC15.86■□□□□ 0.13
RtcbQ99LF4 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RtcbQ99LF4 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC15.86■□□□□ 0.13
RtcbQ99LF4 AY036118-201ENSMUST00000200021 923 ntBASIC15.86■□□□□ 0.13
RtcbQ99LF4 AC122876.1-201ENSMUST00000217619 825 ntBASIC15.86■□□□□ 0.13
RtcbQ99LF4 AC125486.1-201ENSMUST00000218701 320 ntBASIC15.86■□□□□ 0.13
RtcbQ99LF4 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RtcbQ99LF4 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC15.86■□□□□ 0.13
RtcbQ99LF4 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RtcbQ99LF4 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RtcbQ99LF4 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RtcbQ99LF4 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
RtcbQ99LF4 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
RtcbQ99LF4 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RtcbQ99LF4 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
RtcbQ99LF4 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RtcbQ99LF4 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
RtcbQ99LF4 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RtcbQ99LF4 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RtcbQ99LF4 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
RtcbQ99LF4 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RtcbQ99LF4 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RtcbQ99LF4 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
RtcbQ99LF4 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
RtcbQ99LF4 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
RtcbQ99LF4 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
RtcbQ99LF4 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RtcbQ99LF4 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RtcbQ99LF4 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RtcbQ99LF4 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
RtcbQ99LF4 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RtcbQ99LF4 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC15.85■□□□□ 0.13
RtcbQ99LF4 Gm14644-201ENSMUST00000116671 647 ntBASIC15.85■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms