Protein–RNA interactions for Protein: Q99KU0

Vmp1, Vacuole membrane protein 1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmp1Q99KU0 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vmp1Q99KU0 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vmp1Q99KU0 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vmp1Q99KU0 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vmp1Q99KU0 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Vmp1Q99KU0 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vmp1Q99KU0 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vmp1Q99KU0 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vmp1Q99KU0 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vmp1Q99KU0 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Vmp1Q99KU0 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vmp1Q99KU0 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Vmp1Q99KU0 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Vmp1Q99KU0 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Vmp1Q99KU0 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.5□□□□□ -0.41
Vmp1Q99KU0 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vmp1Q99KU0 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Vmp1Q99KU0 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.5□□□□□ -0.41
Vmp1Q99KU0 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vmp1Q99KU0 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vmp1Q99KU0 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vmp1Q99KU0 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.5□□□□□ -0.41
Vmp1Q99KU0 Gm12928-201ENSMUST00000117115 573 ntBASIC12.5□□□□□ -0.41
Vmp1Q99KU0 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.5□□□□□ -0.41
Vmp1Q99KU0 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Vmp1Q99KU0 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
Vmp1Q99KU0 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vmp1Q99KU0 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Vmp1Q99KU0 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vmp1Q99KU0 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vmp1Q99KU0 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vmp1Q99KU0 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vmp1Q99KU0 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vmp1Q99KU0 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vmp1Q99KU0 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.5□□□□□ -0.41
Vmp1Q99KU0 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vmp1Q99KU0 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vmp1Q99KU0 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vmp1Q99KU0 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.5□□□□□ -0.41
Vmp1Q99KU0 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.5□□□□□ -0.41
Vmp1Q99KU0 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.5□□□□□ -0.41
Vmp1Q99KU0 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Vmp1Q99KU0 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Vmp1Q99KU0 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Vmp1Q99KU0 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vmp1Q99KU0 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vmp1Q99KU0 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vmp1Q99KU0 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Vmp1Q99KU0 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vmp1Q99KU0 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.49□□□□□ -0.41
Vmp1Q99KU0 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Vmp1Q99KU0 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vmp1Q99KU0 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.49□□□□□ -0.41
Vmp1Q99KU0 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vmp1Q99KU0 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vmp1Q99KU0 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vmp1Q99KU0 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Vmp1Q99KU0 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Vmp1Q99KU0 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.49□□□□□ -0.41
Vmp1Q99KU0 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vmp1Q99KU0 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Vmp1Q99KU0 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
Vmp1Q99KU0 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Vmp1Q99KU0 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.49□□□□□ -0.41
Vmp1Q99KU0 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
Vmp1Q99KU0 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
Vmp1Q99KU0 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.49□□□□□ -0.41
Vmp1Q99KU0 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vmp1Q99KU0 Gm8463-201ENSMUST00000208573 613 ntBASIC12.49□□□□□ -0.41
Vmp1Q99KU0 Gm17794-201ENSMUST00000220252 955 ntBASIC12.49□□□□□ -0.41
Vmp1Q99KU0 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vmp1Q99KU0 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vmp1Q99KU0 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.49□□□□□ -0.41
Vmp1Q99KU0 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Vmp1Q99KU0 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vmp1Q99KU0 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.49□□□□□ -0.41
Vmp1Q99KU0 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vmp1Q99KU0 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vmp1Q99KU0 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vmp1Q99KU0 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vmp1Q99KU0 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vmp1Q99KU0 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vmp1Q99KU0 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vmp1Q99KU0 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Vmp1Q99KU0 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vmp1Q99KU0 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vmp1Q99KU0 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vmp1Q99KU0 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.48□□□□□ -0.41
Vmp1Q99KU0 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Vmp1Q99KU0 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vmp1Q99KU0 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vmp1Q99KU0 Pck2-205ENSMUST00000226352 2784 ntBASIC12.48□□□□□ -0.41
Vmp1Q99KU0 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Vmp1Q99KU0 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vmp1Q99KU0 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Vmp1Q99KU0 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vmp1Q99KU0 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Vmp1Q99KU0 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC12.48□□□□□ -0.41
Vmp1Q99KU0 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vmp1Q99KU0 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms