Protein–RNA interactions for Protein: Q99KL7

Rab28, Ras-related protein Rab-28, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab28Q99KL7 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rab28Q99KL7 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rab28Q99KL7 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rab28Q99KL7 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rab28Q99KL7 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rab28Q99KL7 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Rab28Q99KL7 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rab28Q99KL7 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rab28Q99KL7 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rab28Q99KL7 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rab28Q99KL7 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rab28Q99KL7 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rab28Q99KL7 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Rab28Q99KL7 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rab28Q99KL7 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rab28Q99KL7 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rab28Q99KL7 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.47□□□□□ -0.41
Rab28Q99KL7 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rab28Q99KL7 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rab28Q99KL7 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rab28Q99KL7 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rab28Q99KL7 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rab28Q99KL7 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
Rab28Q99KL7 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.47□□□□□ -0.41
Rab28Q99KL7 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rab28Q99KL7 Gm13813-201ENSMUST00000120998 787 ntBASIC12.47□□□□□ -0.41
Rab28Q99KL7 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC12.47□□□□□ -0.41
Rab28Q99KL7 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.47□□□□□ -0.41
Rab28Q99KL7 Gm25261-201ENSMUST00000157416 134 ntBASIC12.47□□□□□ -0.41
Rab28Q99KL7 Gm6222-202ENSMUST00000182143 629 ntBASIC12.47□□□□□ -0.41
Rab28Q99KL7 Gm37008-201ENSMUST00000195712 319 ntBASIC12.47□□□□□ -0.41
Rab28Q99KL7 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rab28Q99KL7 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rab28Q99KL7 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rab28Q99KL7 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rab28Q99KL7 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rab28Q99KL7 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rab28Q99KL7 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Rab28Q99KL7 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rab28Q99KL7 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rab28Q99KL7 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rab28Q99KL7 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rab28Q99KL7 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Rab28Q99KL7 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Rab28Q99KL7 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Rab28Q99KL7 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rab28Q99KL7 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rab28Q99KL7 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rab28Q99KL7 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Rab28Q99KL7 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rab28Q99KL7 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Rab28Q99KL7 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rab28Q99KL7 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.46□□□□□ -0.41
Rab28Q99KL7 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rab28Q99KL7 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rab28Q99KL7 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Rab28Q99KL7 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Rab28Q99KL7 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Rab28Q99KL7 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rab28Q99KL7 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.46□□□□□ -0.41
Rab28Q99KL7 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Rab28Q99KL7 Gm17420-201ENSMUST00000164753 153 ntBASIC12.46□□□□□ -0.41
Rab28Q99KL7 Gm19184-201ENSMUST00000196798 928 ntBASIC12.46□□□□□ -0.41
Rab28Q99KL7 Gm18584-201ENSMUST00000203098 964 ntBASIC12.46□□□□□ -0.41
Rab28Q99KL7 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.46□□□□□ -0.41
Rab28Q99KL7 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.46□□□□□ -0.41
Rab28Q99KL7 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rab28Q99KL7 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
Rab28Q99KL7 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rab28Q99KL7 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.46□□□□□ -0.41
Rab28Q99KL7 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rab28Q99KL7 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Rab28Q99KL7 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rab28Q99KL7 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rab28Q99KL7 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rab28Q99KL7 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rab28Q99KL7 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rab28Q99KL7 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rab28Q99KL7 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Rab28Q99KL7 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rab28Q99KL7 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rab28Q99KL7 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rab28Q99KL7 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rab28Q99KL7 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rab28Q99KL7 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rab28Q99KL7 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rab28Q99KL7 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.45□□□□□ -0.42
Rab28Q99KL7 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rab28Q99KL7 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.45□□□□□ -0.42
Rab28Q99KL7 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rab28Q99KL7 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rab28Q99KL7 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC12.45□□□□□ -0.42
Rab28Q99KL7 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.45□□□□□ -0.42
Rab28Q99KL7 Gm7809-201ENSMUST00000153199 742 ntBASIC12.45□□□□□ -0.42
Rab28Q99KL7 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Rab28Q99KL7 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rab28Q99KL7 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.45□□□□□ -0.42
Rab28Q99KL7 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rab28Q99KL7 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rab28Q99KL7 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms