Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Usp11Q99K46 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Usp11Q99K46 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Usp11Q99K46 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Usp11Q99K46 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC13.63□□□□□ -0.23
Usp11Q99K46 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Usp11Q99K46 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Usp11Q99K46 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Usp11Q99K46 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Usp11Q99K46 Gm5912-201ENSMUST00000122282 1438 ntBASIC13.63□□□□□ -0.23
Usp11Q99K46 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Usp11Q99K46 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Usp11Q99K46 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Usp11Q99K46 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Usp11Q99K46 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Usp11Q99K46 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Usp11Q99K46 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC13.63□□□□□ -0.23
Usp11Q99K46 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Usp11Q99K46 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Usp11Q99K46 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC13.62□□□□□ -0.23
Usp11Q99K46 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Usp11Q99K46 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Usp11Q99K46 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Usp11Q99K46 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Usp11Q99K46 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC13.62□□□□□ -0.23
Usp11Q99K46 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Usp11Q99K46 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Usp11Q99K46 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Usp11Q99K46 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC13.62□□□□□ -0.23
Usp11Q99K46 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Usp11Q99K46 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Usp11Q99K46 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Usp11Q99K46 Mir692-1-201ENSMUST00000102263 109 ntBASIC13.62□□□□□ -0.23
Usp11Q99K46 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC13.62□□□□□ -0.23
Usp11Q99K46 Gm11478-201ENSMUST00000117851 599 ntBASIC13.62□□□□□ -0.23
Usp11Q99K46 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC13.62□□□□□ -0.23
Usp11Q99K46 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC13.62□□□□□ -0.23
Usp11Q99K46 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Usp11Q99K46 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
Usp11Q99K46 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Usp11Q99K46 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Usp11Q99K46 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Usp11Q99K46 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC13.62□□□□□ -0.23
Usp11Q99K46 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Usp11Q99K46 Gm9002-201ENSMUST00000178437 499 ntBASIC13.62□□□□□ -0.23
Usp11Q99K46 Gm5276-201ENSMUST00000196683 1047 ntBASIC13.62□□□□□ -0.23
Usp11Q99K46 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Usp11Q99K46 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Usp11Q99K46 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Usp11Q99K46 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Usp11Q99K46 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Usp11Q99K46 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Usp11Q99K46 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Usp11Q99K46 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Usp11Q99K46 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Usp11Q99K46 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Usp11Q99K46 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Usp11Q99K46 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Usp11Q99K46 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Usp11Q99K46 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Usp11Q99K46 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Usp11Q99K46 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Usp11Q99K46 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Usp11Q99K46 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Usp11Q99K46 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.62□□□□□ -0.23
Usp11Q99K46 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Usp11Q99K46 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC13.61□□□□□ -0.23
Usp11Q99K46 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Usp11Q99K46 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usp11Q99K46 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Usp11Q99K46 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usp11Q99K46 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usp11Q99K46 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usp11Q99K46 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Usp11Q99K46 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC13.61□□□□□ -0.23
Usp11Q99K46 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usp11Q99K46 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usp11Q99K46 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Usp11Q99K46 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Usp11Q99K46 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usp11Q99K46 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC13.61□□□□□ -0.23
Usp11Q99K46 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC13.61□□□□□ -0.23
Usp11Q99K46 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Usp11Q99K46 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC13.61□□□□□ -0.23
Usp11Q99K46 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC13.61□□□□□ -0.23
Usp11Q99K46 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usp11Q99K46 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Usp11Q99K46 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usp11Q99K46 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usp11Q99K46 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC13.61□□□□□ -0.23
Usp11Q99K46 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usp11Q99K46 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usp11Q99K46 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.61□□□□□ -0.23
Usp11Q99K46 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usp11Q99K46 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Usp11Q99K46 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC13.61□□□□□ -0.23
Usp11Q99K46 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usp11Q99K46 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usp11Q99K46 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usp11Q99K46 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms