Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb1Q91Y08 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb1Q91Y08 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb1Q91Y08 Gm38385-201ENSMUST00000194454 2351 ntBASIC13.43□□□□□ -0.26
Pcdhb1Q91Y08 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Pcdhb1Q91Y08 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC13.43□□□□□ -0.26
Pcdhb1Q91Y08 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb1Q91Y08 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC13.43□□□□□ -0.26
Pcdhb1Q91Y08 Gm13369-201ENSMUST00000119442 987 ntBASIC13.43□□□□□ -0.26
Pcdhb1Q91Y08 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC13.43□□□□□ -0.26
Pcdhb1Q91Y08 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb1Q91Y08 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb1Q91Y08 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC13.43□□□□□ -0.26
Pcdhb1Q91Y08 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb1Q91Y08 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC13.43□□□□□ -0.26
Pcdhb1Q91Y08 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb1Q91Y08 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC13.43□□□□□ -0.26
Pcdhb1Q91Y08 Gm43416-201ENSMUST00000201916 1015 ntBASIC13.43□□□□□ -0.26
Pcdhb1Q91Y08 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb1Q91Y08 Gm5035-201ENSMUST00000215581 927 ntBASIC13.43□□□□□ -0.26
Pcdhb1Q91Y08 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC13.43□□□□□ -0.26
Pcdhb1Q91Y08 Cdk7-205ENSMUST00000225990 1159 ntBASIC13.43□□□□□ -0.26
Pcdhb1Q91Y08 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb1Q91Y08 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb1Q91Y08 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb1Q91Y08 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb1Q91Y08 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb1Q91Y08 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Pcdhb1Q91Y08 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Pcdhb1Q91Y08 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Pcdhb1Q91Y08 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Pcdhb1Q91Y08 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb1Q91Y08 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb1Q91Y08 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Pcdhb1Q91Y08 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb1Q91Y08 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb1Q91Y08 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb1Q91Y08 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Pcdhb1Q91Y08 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb1Q91Y08 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb1Q91Y08 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC13.42□□□□□ -0.26
Pcdhb1Q91Y08 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC13.42□□□□□ -0.26
Pcdhb1Q91Y08 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
Pcdhb1Q91Y08 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb1Q91Y08 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Pcdhb1Q91Y08 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb1Q91Y08 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb1Q91Y08 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb1Q91Y08 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC13.42□□□□□ -0.26
Pcdhb1Q91Y08 CT009713.10-201ENSMUST00000225013 1986 ntBASIC13.42□□□□□ -0.26
Pcdhb1Q91Y08 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb1Q91Y08 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb1Q91Y08 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb1Q91Y08 Gm11478-201ENSMUST00000117851 599 ntBASIC13.42□□□□□ -0.26
Pcdhb1Q91Y08 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC13.42□□□□□ -0.26
Pcdhb1Q91Y08 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC13.42□□□□□ -0.26
Pcdhb1Q91Y08 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb1Q91Y08 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb1Q91Y08 Gm22331-201ENSMUST00000158066 136 ntBASIC13.42□□□□□ -0.26
Pcdhb1Q91Y08 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb1Q91Y08 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb1Q91Y08 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Pcdhb1Q91Y08 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Pcdhb1Q91Y08 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb1Q91Y08 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Pcdhb1Q91Y08 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb1Q91Y08 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb1Q91Y08 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb1Q91Y08 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
Pcdhb1Q91Y08 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb1Q91Y08 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Pcdhb1Q91Y08 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb1Q91Y08 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb1Q91Y08 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb1Q91Y08 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
Pcdhb1Q91Y08 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb1Q91Y08 Gm27194-201ENSMUST00000175753 2936 ntBASIC13.41□□□□□ -0.26
Pcdhb1Q91Y08 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb1Q91Y08 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb1Q91Y08 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb1Q91Y08 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb1Q91Y08 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb1Q91Y08 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Pcdhb1Q91Y08 Gm5638-201ENSMUST00000118618 1258 ntBASIC13.41□□□□□ -0.26
Pcdhb1Q91Y08 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC13.41□□□□□ -0.26
Pcdhb1Q91Y08 Gm14704-201ENSMUST00000120300 874 ntBASIC13.41□□□□□ -0.26
Pcdhb1Q91Y08 Gm24644-201ENSMUST00000157114 139 ntBASIC13.41□□□□□ -0.26
Pcdhb1Q91Y08 Gm27331-201ENSMUST00000183705 60 ntBASIC13.41□□□□□ -0.26
Pcdhb1Q91Y08 Gm27847-201ENSMUST00000183711 107 ntBASIC13.41□□□□□ -0.26
Pcdhb1Q91Y08 Gm27375-201ENSMUST00000183799 107 ntBASIC13.41□□□□□ -0.26
Pcdhb1Q91Y08 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC13.41□□□□□ -0.26
Pcdhb1Q91Y08 Gm18916-201ENSMUST00000198264 1246 ntBASIC13.41□□□□□ -0.26
Pcdhb1Q91Y08 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb1Q91Y08 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb1Q91Y08 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb1Q91Y08 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb1Q91Y08 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb1Q91Y08 Gm10146-201ENSMUST00000072739 309 ntBASIC13.41□□□□□ -0.26
Pcdhb1Q91Y08 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb1Q91Y08 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms