Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhga11Q91XY8 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhga11Q91XY8 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhga11Q91XY8 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhga11Q91XY8 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhga11Q91XY8 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.54□□□□□ -0.4
Pcdhga11Q91XY8 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhga11Q91XY8 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhga11Q91XY8 Gm37660-201ENSMUST00000192754 1732 ntBASIC12.54□□□□□ -0.4
Pcdhga11Q91XY8 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.54□□□□□ -0.4
Pcdhga11Q91XY8 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhga11Q91XY8 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Pcdhga11Q91XY8 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhga11Q91XY8 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhga11Q91XY8 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhga11Q91XY8 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhga11Q91XY8 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhga11Q91XY8 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhga11Q91XY8 Gm13689-201ENSMUST00000119360 685 ntBASIC12.54□□□□□ -0.4
Pcdhga11Q91XY8 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.54□□□□□ -0.4
Pcdhga11Q91XY8 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhga11Q91XY8 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC12.54□□□□□ -0.4
Pcdhga11Q91XY8 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.54□□□□□ -0.4
Pcdhga11Q91XY8 Mir7654-201ENSMUST00000185082 70 ntBASIC12.54□□□□□ -0.4
Pcdhga11Q91XY8 Gm45384-201ENSMUST00000210451 277 ntBASIC12.54□□□□□ -0.4
Pcdhga11Q91XY8 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC12.54□□□□□ -0.4
Pcdhga11Q91XY8 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.54□□□□□ -0.4
Pcdhga11Q91XY8 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhga11Q91XY8 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhga11Q91XY8 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Pcdhga11Q91XY8 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhga11Q91XY8 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Pcdhga11Q91XY8 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhga11Q91XY8 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Pcdhga11Q91XY8 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhga11Q91XY8 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhga11Q91XY8 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhga11Q91XY8 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhga11Q91XY8 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhga11Q91XY8 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhga11Q91XY8 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhga11Q91XY8 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhga11Q91XY8 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhga11Q91XY8 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhga11Q91XY8 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhga11Q91XY8 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC12.53□□□□□ -0.4
Pcdhga11Q91XY8 Itm2b-204ENSMUST00000228637 783 ntBASIC12.53□□□□□ -0.4
Pcdhga11Q91XY8 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhga11Q91XY8 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhga11Q91XY8 Gm40377-201ENSMUST00000204604 2015 ntBASIC12.53□□□□□ -0.4
Pcdhga11Q91XY8 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.53□□□□□ -0.4
Pcdhga11Q91XY8 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.53□□□□□ -0.4
Pcdhga11Q91XY8 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Pcdhga11Q91XY8 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Pcdhga11Q91XY8 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhga11Q91XY8 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhga11Q91XY8 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.53□□□□□ -0.4
Pcdhga11Q91XY8 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhga11Q91XY8 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Pcdhga11Q91XY8 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhga11Q91XY8 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhga11Q91XY8 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Pcdhga11Q91XY8 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdhga11Q91XY8 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdhga11Q91XY8 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdhga11Q91XY8 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.52□□□□□ -0.4
Pcdhga11Q91XY8 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.4
Pcdhga11Q91XY8 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdhga11Q91XY8 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdhga11Q91XY8 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdhga11Q91XY8 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.52□□□□□ -0.4
Pcdhga11Q91XY8 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhga11Q91XY8 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhga11Q91XY8 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Pcdhga11Q91XY8 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhga11Q91XY8 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhga11Q91XY8 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhga11Q91XY8 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.52□□□□□ -0.41
Pcdhga11Q91XY8 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhga11Q91XY8 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.52□□□□□ -0.41
Pcdhga11Q91XY8 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhga11Q91XY8 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Pcdhga11Q91XY8 Gm11918-201ENSMUST00000121660 179 ntBASIC12.52□□□□□ -0.41
Pcdhga11Q91XY8 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC12.52□□□□□ -0.41
Pcdhga11Q91XY8 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhga11Q91XY8 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC12.52□□□□□ -0.41
Pcdhga11Q91XY8 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhga11Q91XY8 Gm45059-201ENSMUST00000205558 1077 ntBASIC12.52□□□□□ -0.41
Pcdhga11Q91XY8 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC12.52□□□□□ -0.41
Pcdhga11Q91XY8 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhga11Q91XY8 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhga11Q91XY8 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhga11Q91XY8 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhga11Q91XY8 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhga11Q91XY8 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhga11Q91XY8 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhga11Q91XY8 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
Pcdhga11Q91XY8 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhga11Q91XY8 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhga11Q91XY8 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms