Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhga4Q91XY4 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhga4Q91XY4 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhga4Q91XY4 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Pcdhga4Q91XY4 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhga4Q91XY4 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhga4Q91XY4 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhga4Q91XY4 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.76□□□□□ -0.37
Pcdhga4Q91XY4 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Pcdhga4Q91XY4 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhga4Q91XY4 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhga4Q91XY4 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhga4Q91XY4 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhga4Q91XY4 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhga4Q91XY4 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.76□□□□□ -0.37
Pcdhga4Q91XY4 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhga4Q91XY4 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhga4Q91XY4 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhga4Q91XY4 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhga4Q91XY4 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.75□□□□□ -0.37
Pcdhga4Q91XY4 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhga4Q91XY4 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhga4Q91XY4 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhga4Q91XY4 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhga4Q91XY4 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Pcdhga4Q91XY4 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhga4Q91XY4 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhga4Q91XY4 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhga4Q91XY4 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhga4Q91XY4 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.75□□□□□ -0.37
Pcdhga4Q91XY4 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhga4Q91XY4 Gm22331-201ENSMUST00000158066 136 ntBASIC12.75□□□□□ -0.37
Pcdhga4Q91XY4 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhga4Q91XY4 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.75□□□□□ -0.37
Pcdhga4Q91XY4 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhga4Q91XY4 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhga4Q91XY4 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.75□□□□□ -0.37
Pcdhga4Q91XY4 Gm29127-201ENSMUST00000188304 517 ntBASIC12.75□□□□□ -0.37
Pcdhga4Q91XY4 Gm45784-201ENSMUST00000188360 142 ntBASIC12.75□□□□□ -0.37
Pcdhga4Q91XY4 Gm43818-201ENSMUST00000200605 466 ntBASIC12.75□□□□□ -0.37
Pcdhga4Q91XY4 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC12.75□□□□□ -0.37
Pcdhga4Q91XY4 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.75□□□□□ -0.37
Pcdhga4Q91XY4 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhga4Q91XY4 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhga4Q91XY4 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhga4Q91XY4 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhga4Q91XY4 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhga4Q91XY4 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.75□□□□□ -0.37
Pcdhga4Q91XY4 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhga4Q91XY4 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhga4Q91XY4 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhga4Q91XY4 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.75□□□□□ -0.37
Pcdhga4Q91XY4 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhga4Q91XY4 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhga4Q91XY4 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhga4Q91XY4 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhga4Q91XY4 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhga4Q91XY4 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhga4Q91XY4 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhga4Q91XY4 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhga4Q91XY4 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhga4Q91XY4 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhga4Q91XY4 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhga4Q91XY4 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.74□□□□□ -0.37
Pcdhga4Q91XY4 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhga4Q91XY4 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Pcdhga4Q91XY4 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhga4Q91XY4 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhga4Q91XY4 Gm11803-201ENSMUST00000119966 444 ntBASIC12.74□□□□□ -0.37
Pcdhga4Q91XY4 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhga4Q91XY4 Mir1982-201ENSMUST00000157368 74 ntBASIC12.74□□□□□ -0.37
Pcdhga4Q91XY4 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
Pcdhga4Q91XY4 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Pcdhga4Q91XY4 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.74□□□□□ -0.37
Pcdhga4Q91XY4 Proscos-202ENSMUST00000178990 666 ntBASIC12.74□□□□□ -0.37
Pcdhga4Q91XY4 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhga4Q91XY4 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.74□□□□□ -0.37
Pcdhga4Q91XY4 AY702102-202ENSMUST00000194651 1173 ntBASIC12.74□□□□□ -0.37
Pcdhga4Q91XY4 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhga4Q91XY4 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.74□□□□□ -0.37
Pcdhga4Q91XY4 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.74□□□□□ -0.37
Pcdhga4Q91XY4 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC12.74□□□□□ -0.37
Pcdhga4Q91XY4 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhga4Q91XY4 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhga4Q91XY4 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.74□□□□□ -0.37
Pcdhga4Q91XY4 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhga4Q91XY4 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Pcdhga4Q91XY4 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhga4Q91XY4 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhga4Q91XY4 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.74□□□□□ -0.37
Pcdhga4Q91XY4 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.74□□□□□ -0.37
Pcdhga4Q91XY4 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhga4Q91XY4 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Pcdhga4Q91XY4 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.74□□□□□ -0.37
Pcdhga4Q91XY4 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhga4Q91XY4 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhga4Q91XY4 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhga4Q91XY4 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhga4Q91XY4 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhga4Q91XY4 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms