Protein–RNA interactions for Protein: Q91VR5

Ddx1, ATP-dependent RNA helicase DDX1, mousemouse

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx1Q91VR5 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx1Q91VR5 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx1Q91VR5 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx1Q91VR5 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx1Q91VR5 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx1Q91VR5 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx1Q91VR5 Gm3052-202ENSMUST00000188254 2224 ntBASIC13.37□□□□□ -0.27
Ddx1Q91VR5 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC13.37□□□□□ -0.27
Ddx1Q91VR5 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx1Q91VR5 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx1Q91VR5 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx1Q91VR5 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx1Q91VR5 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx1Q91VR5 Gm10339-203ENSMUST00000225409 1671 ntBASIC13.37□□□□□ -0.27
Ddx1Q91VR5 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx1Q91VR5 AC241621.2-201ENSMUST00000223991 2151 ntBASIC13.37□□□□□ -0.27
Ddx1Q91VR5 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx1Q91VR5 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx1Q91VR5 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx1Q91VR5 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx1Q91VR5 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx1Q91VR5 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx1Q91VR5 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx1Q91VR5 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx1Q91VR5 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx1Q91VR5 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx1Q91VR5 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC13.36□□□□□ -0.27
Ddx1Q91VR5 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx1Q91VR5 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx1Q91VR5 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC13.36□□□□□ -0.27
Ddx1Q91VR5 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx1Q91VR5 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx1Q91VR5 Gm28693-202ENSMUST00000190758 331 ntBASIC13.36□□□□□ -0.27
Ddx1Q91VR5 Gm43118-201ENSMUST00000199149 775 ntBASIC13.36□□□□□ -0.27
Ddx1Q91VR5 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC13.36□□□□□ -0.27
Ddx1Q91VR5 Gm5363-201ENSMUST00000211927 938 ntBASIC13.36□□□□□ -0.27
Ddx1Q91VR5 Gm45930-201ENSMUST00000221330 292 ntBASIC13.36□□□□□ -0.27
Ddx1Q91VR5 AC140406.1-201ENSMUST00000226481 465 ntBASIC13.36□□□□□ -0.27
Ddx1Q91VR5 AC093022.5-201ENSMUST00000226841 1079 ntBASIC13.36□□□□□ -0.27
Ddx1Q91VR5 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx1Q91VR5 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx1Q91VR5 Gm16372-201ENSMUST00000073088 450 ntBASIC13.36□□□□□ -0.27
Ddx1Q91VR5 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC13.36□□□□□ -0.27
Ddx1Q91VR5 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Ddx1Q91VR5 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx1Q91VR5 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx1Q91VR5 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx1Q91VR5 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx1Q91VR5 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx1Q91VR5 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx1Q91VR5 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx1Q91VR5 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Ddx1Q91VR5 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.36□□□□□ -0.27
Ddx1Q91VR5 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx1Q91VR5 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx1Q91VR5 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC13.35□□□□□ -0.27
Ddx1Q91VR5 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx1Q91VR5 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Ddx1Q91VR5 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Ddx1Q91VR5 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Ddx1Q91VR5 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx1Q91VR5 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx1Q91VR5 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx1Q91VR5 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx1Q91VR5 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx1Q91VR5 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx1Q91VR5 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx1Q91VR5 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx1Q91VR5 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx1Q91VR5 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx1Q91VR5 Gm11618-201ENSMUST00000117946 267 ntBASIC13.35□□□□□ -0.27
Ddx1Q91VR5 Gm8213-201ENSMUST00000118191 441 ntBASIC13.35□□□□□ -0.27
Ddx1Q91VR5 Gm11803-201ENSMUST00000119966 444 ntBASIC13.35□□□□□ -0.27
Ddx1Q91VR5 Gm13123-201ENSMUST00000122173 492 ntBASIC13.35□□□□□ -0.27
Ddx1Q91VR5 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx1Q91VR5 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx1Q91VR5 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC13.35□□□□□ -0.27
Ddx1Q91VR5 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx1Q91VR5 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC13.35□□□□□ -0.27
Ddx1Q91VR5 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC13.35□□□□□ -0.27
Ddx1Q91VR5 Gm17823-201ENSMUST00000217830 1006 ntBASIC13.35□□□□□ -0.27
Ddx1Q91VR5 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx1Q91VR5 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx1Q91VR5 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx1Q91VR5 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx1Q91VR5 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx1Q91VR5 Gm28323-201ENSMUST00000186817 2499 ntBASIC13.35□□□□□ -0.27
Ddx1Q91VR5 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx1Q91VR5 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx1Q91VR5 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Ddx1Q91VR5 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx1Q91VR5 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx1Q91VR5 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx1Q91VR5 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ddx1Q91VR5 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ddx1Q91VR5 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ddx1Q91VR5 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ddx1Q91VR5 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13.34□□□□□ -0.27
Ddx1Q91VR5 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ddx1Q91VR5 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms