Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
H1fooQ8VIK3 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC10.84□□□□□ -0.67
H1fooQ8VIK3 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC10.84□□□□□ -0.67
H1fooQ8VIK3 Gm12091-201ENSMUST00000146791 830 ntBASIC10.84□□□□□ -0.67
H1fooQ8VIK3 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
H1fooQ8VIK3 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC10.84□□□□□ -0.67
H1fooQ8VIK3 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
H1fooQ8VIK3 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
H1fooQ8VIK3 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC10.84□□□□□ -0.67
H1fooQ8VIK3 Gm18018-201ENSMUST00000198273 408 ntBASIC10.84□□□□□ -0.67
H1fooQ8VIK3 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC10.84□□□□□ -0.67
H1fooQ8VIK3 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC10.84□□□□□ -0.67
H1fooQ8VIK3 Gm6458-201ENSMUST00000211573 635 ntBASIC10.84□□□□□ -0.67
H1fooQ8VIK3 Gm18473-201ENSMUST00000220543 868 ntBASIC10.84□□□□□ -0.67
H1fooQ8VIK3 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
H1fooQ8VIK3 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
H1fooQ8VIK3 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
H1fooQ8VIK3 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
H1fooQ8VIK3 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
H1fooQ8VIK3 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
H1fooQ8VIK3 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
H1fooQ8VIK3 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
H1fooQ8VIK3 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
H1fooQ8VIK3 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
H1fooQ8VIK3 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC10.84□□□□□ -0.67
H1fooQ8VIK3 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC10.84□□□□□ -0.67
H1fooQ8VIK3 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
H1fooQ8VIK3 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
H1fooQ8VIK3 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
H1fooQ8VIK3 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
H1fooQ8VIK3 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
H1fooQ8VIK3 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC10.84□□□□□ -0.67
H1fooQ8VIK3 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC10.84□□□□□ -0.67
H1fooQ8VIK3 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
H1fooQ8VIK3 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
H1fooQ8VIK3 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
H1fooQ8VIK3 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
H1fooQ8VIK3 AC116503.1-201ENSMUST00000215445 2192 ntBASIC10.83□□□□□ -0.68
H1fooQ8VIK3 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
H1fooQ8VIK3 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
H1fooQ8VIK3 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
H1fooQ8VIK3 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
H1fooQ8VIK3 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
H1fooQ8VIK3 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
H1fooQ8VIK3 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
H1fooQ8VIK3 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
H1fooQ8VIK3 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC10.83□□□□□ -0.68
H1fooQ8VIK3 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
H1fooQ8VIK3 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
H1fooQ8VIK3 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
H1fooQ8VIK3 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
H1fooQ8VIK3 Gm27701-201ENSMUST00000184498 110 ntBASIC10.83□□□□□ -0.68
H1fooQ8VIK3 Gm2495-201ENSMUST00000191160 466 ntBASIC10.83□□□□□ -0.68
H1fooQ8VIK3 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC10.83□□□□□ -0.68
H1fooQ8VIK3 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC10.83□□□□□ -0.68
H1fooQ8VIK3 Gm44069-201ENSMUST00000204898 506 ntBASIC10.83□□□□□ -0.68
H1fooQ8VIK3 Gm44064-201ENSMUST00000204964 1087 ntBASIC10.83□□□□□ -0.68
H1fooQ8VIK3 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC10.83□□□□□ -0.68
H1fooQ8VIK3 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
H1fooQ8VIK3 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
H1fooQ8VIK3 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC10.83□□□□□ -0.68
H1fooQ8VIK3 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
H1fooQ8VIK3 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
H1fooQ8VIK3 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
H1fooQ8VIK3 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
H1fooQ8VIK3 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
H1fooQ8VIK3 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
H1fooQ8VIK3 Ntrk2-204ENSMUST00000224259 3049 ntBASIC10.83□□□□□ -0.68
H1fooQ8VIK3 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
H1fooQ8VIK3 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
H1fooQ8VIK3 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
H1fooQ8VIK3 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
H1fooQ8VIK3 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
H1fooQ8VIK3 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
H1fooQ8VIK3 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
H1fooQ8VIK3 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
H1fooQ8VIK3 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC10.83□□□□□ -0.68
H1fooQ8VIK3 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC10.83□□□□□ -0.68
H1fooQ8VIK3 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC10.83□□□□□ -0.68
H1fooQ8VIK3 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC10.83□□□□□ -0.68
H1fooQ8VIK3 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
H1fooQ8VIK3 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
H1fooQ8VIK3 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC10.82□□□□□ -0.68
H1fooQ8VIK3 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
H1fooQ8VIK3 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
H1fooQ8VIK3 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
H1fooQ8VIK3 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
H1fooQ8VIK3 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
H1fooQ8VIK3 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
H1fooQ8VIK3 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
H1fooQ8VIK3 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC10.82□□□□□ -0.68
H1fooQ8VIK3 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
H1fooQ8VIK3 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
H1fooQ8VIK3 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
H1fooQ8VIK3 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
H1fooQ8VIK3 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
H1fooQ8VIK3 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
H1fooQ8VIK3 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
H1fooQ8VIK3 Gm11978-201ENSMUST00000122315 466 ntBASIC10.82□□□□□ -0.68
H1fooQ8VIK3 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms