Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC13.33□□□□□ -0.28
Rprd1aQ8VDS4 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rprd1aQ8VDS4 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.33□□□□□ -0.28
Rprd1aQ8VDS4 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC13.33□□□□□ -0.28
Rprd1aQ8VDS4 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rprd1aQ8VDS4 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rprd1aQ8VDS4 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rprd1aQ8VDS4 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rprd1aQ8VDS4 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rprd1aQ8VDS4 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Rprd1aQ8VDS4 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rprd1aQ8VDS4 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Rprd1aQ8VDS4 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rprd1aQ8VDS4 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rprd1aQ8VDS4 Gm37324-201ENSMUST00000194500 4504 ntBASIC13.33□□□□□ -0.28
Rprd1aQ8VDS4 Gm5620-201ENSMUST00000077991 1348 ntBASIC13.33□□□□□ -0.28
Rprd1aQ8VDS4 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rprd1aQ8VDS4 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Rprd1aQ8VDS4 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
Rprd1aQ8VDS4 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Rprd1aQ8VDS4 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rprd1aQ8VDS4 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Rprd1aQ8VDS4 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rprd1aQ8VDS4 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Rprd1aQ8VDS4 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC13.32□□□□□ -0.28
Rprd1aQ8VDS4 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rprd1aQ8VDS4 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rprd1aQ8VDS4 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rprd1aQ8VDS4 Gm43321-201ENSMUST00000198897 2409 ntBASIC13.32□□□□□ -0.28
Rprd1aQ8VDS4 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rprd1aQ8VDS4 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rprd1aQ8VDS4 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.32□□□□□ -0.28
Rprd1aQ8VDS4 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rprd1aQ8VDS4 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rprd1aQ8VDS4 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rprd1aQ8VDS4 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rprd1aQ8VDS4 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rprd1aQ8VDS4 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rprd1aQ8VDS4 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rprd1aQ8VDS4 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Rprd1aQ8VDS4 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC13.32□□□□□ -0.28
Rprd1aQ8VDS4 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rprd1aQ8VDS4 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC13.32□□□□□ -0.28
Rprd1aQ8VDS4 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rprd1aQ8VDS4 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rprd1aQ8VDS4 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Rprd1aQ8VDS4 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rprd1aQ8VDS4 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC13.32□□□□□ -0.28
Rprd1aQ8VDS4 Tyms-ps-201ENSMUST00000219550 915 ntBASIC13.32□□□□□ -0.28
Rprd1aQ8VDS4 Gm19163-201ENSMUST00000223313 780 ntBASIC13.32□□□□□ -0.28
Rprd1aQ8VDS4 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rprd1aQ8VDS4 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.32□□□□□ -0.28
Rprd1aQ8VDS4 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rprd1aQ8VDS4 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rprd1aQ8VDS4 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rprd1aQ8VDS4 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rprd1aQ8VDS4 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Rprd1aQ8VDS4 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rprd1aQ8VDS4 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rprd1aQ8VDS4 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rprd1aQ8VDS4 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rprd1aQ8VDS4 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Rprd1aQ8VDS4 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rprd1aQ8VDS4 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rprd1aQ8VDS4 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rprd1aQ8VDS4 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rprd1aQ8VDS4 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rprd1aQ8VDS4 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rprd1aQ8VDS4 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Rprd1aQ8VDS4 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rprd1aQ8VDS4 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rprd1aQ8VDS4 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC13.31□□□□□ -0.28
Rprd1aQ8VDS4 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rprd1aQ8VDS4 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rprd1aQ8VDS4 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Rprd1aQ8VDS4 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rprd1aQ8VDS4 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rprd1aQ8VDS4 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rprd1aQ8VDS4 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rprd1aQ8VDS4 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rprd1aQ8VDS4 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rprd1aQ8VDS4 Gm8062-201ENSMUST00000139696 444 ntBASIC13.31□□□□□ -0.28
Rprd1aQ8VDS4 Gm17208-201ENSMUST00000168388 535 ntBASIC13.31□□□□□ -0.28
Rprd1aQ8VDS4 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rprd1aQ8VDS4 Gm37424-201ENSMUST00000191727 561 ntBASIC13.31□□□□□ -0.28
Rprd1aQ8VDS4 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rprd1aQ8VDS4 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rprd1aQ8VDS4 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rprd1aQ8VDS4 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC13.31□□□□□ -0.28
Rprd1aQ8VDS4 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rprd1aQ8VDS4 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rprd1aQ8VDS4 Gm9025-201ENSMUST00000122415 1575 ntBASIC13.31□□□□□ -0.28
Rprd1aQ8VDS4 Gm38355-201ENSMUST00000192514 1570 ntBASIC13.31□□□□□ -0.28
Rprd1aQ8VDS4 AC113060.1-201ENSMUST00000225689 1573 ntBASIC13.31□□□□□ -0.28
Rprd1aQ8VDS4 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rprd1aQ8VDS4 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rprd1aQ8VDS4 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rprd1aQ8VDS4 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rprd1aQ8VDS4 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Rprd1aQ8VDS4 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms