Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm1Q8VC85 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Lsm1Q8VC85 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.4□□□□□ -0.42
Lsm1Q8VC85 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm1Q8VC85 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm1Q8VC85 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Lsm1Q8VC85 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Lsm1Q8VC85 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Lsm1Q8VC85 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Lsm1Q8VC85 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Lsm1Q8VC85 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Lsm1Q8VC85 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm1Q8VC85 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm1Q8VC85 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Lsm1Q8VC85 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.39□□□□□ -0.43
Lsm1Q8VC85 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm1Q8VC85 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.39□□□□□ -0.43
Lsm1Q8VC85 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm1Q8VC85 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Lsm1Q8VC85 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm1Q8VC85 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm1Q8VC85 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Lsm1Q8VC85 Gm12859-201ENSMUST00000117834 427 ntBASIC12.39□□□□□ -0.43
Lsm1Q8VC85 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Lsm1Q8VC85 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.39□□□□□ -0.43
Lsm1Q8VC85 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm1Q8VC85 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.39□□□□□ -0.43
Lsm1Q8VC85 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.39□□□□□ -0.43
Lsm1Q8VC85 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.39□□□□□ -0.43
Lsm1Q8VC85 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm1Q8VC85 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm1Q8VC85 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm1Q8VC85 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm1Q8VC85 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Lsm1Q8VC85 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm1Q8VC85 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm1Q8VC85 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm1Q8VC85 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm1Q8VC85 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm1Q8VC85 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.39□□□□□ -0.43
Lsm1Q8VC85 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm1Q8VC85 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Lsm1Q8VC85 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm1Q8VC85 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm1Q8VC85 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.39□□□□□ -0.43
Lsm1Q8VC85 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm1Q8VC85 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm1Q8VC85 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm1Q8VC85 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm1Q8VC85 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm1Q8VC85 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm1Q8VC85 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.39□□□□□ -0.43
Lsm1Q8VC85 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm1Q8VC85 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm1Q8VC85 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm1Q8VC85 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm1Q8VC85 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm1Q8VC85 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Lsm1Q8VC85 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm1Q8VC85 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.38□□□□□ -0.43
Lsm1Q8VC85 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.38□□□□□ -0.43
Lsm1Q8VC85 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm1Q8VC85 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm1Q8VC85 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm1Q8VC85 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm1Q8VC85 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm1Q8VC85 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.38□□□□□ -0.43
Lsm1Q8VC85 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm1Q8VC85 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Lsm1Q8VC85 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm1Q8VC85 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.38□□□□□ -0.43
Lsm1Q8VC85 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm1Q8VC85 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm1Q8VC85 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm1Q8VC85 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm1Q8VC85 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm1Q8VC85 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm1Q8VC85 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm1Q8VC85 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm1Q8VC85 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm1Q8VC85 Gm7488-201ENSMUST00000117148 684 ntBASIC12.38□□□□□ -0.43
Lsm1Q8VC85 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm1Q8VC85 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm1Q8VC85 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC12.38□□□□□ -0.43
Lsm1Q8VC85 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC12.38□□□□□ -0.43
Lsm1Q8VC85 Gm16372-201ENSMUST00000073088 450 ntBASIC12.38□□□□□ -0.43
Lsm1Q8VC85 Gm2423-201ENSMUST00000074863 733 ntBASIC12.38□□□□□ -0.43
Lsm1Q8VC85 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Lsm1Q8VC85 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Lsm1Q8VC85 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm1Q8VC85 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm1Q8VC85 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm1Q8VC85 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm1Q8VC85 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm1Q8VC85 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.38□□□□□ -0.43
Lsm1Q8VC85 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.37□□□□□ -0.43
Lsm1Q8VC85 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC12.37□□□□□ -0.43
Lsm1Q8VC85 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC12.37□□□□□ -0.43
Lsm1Q8VC85 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm1Q8VC85 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms